LOCUS BC002505 495 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens small nuclear ribonucleoprotein polypeptide F, mRNA
(cDNA clone MGC:1615 IMAGE:3051263), complete cds.
ACCESSION BC002505
VERSION BC002505.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 495)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 495)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002505.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: i Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507130.
FEATURES Location/Qualifiers
source 1..495
/db_xref="H-InvDB:HIT000030947"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1615 IMAGE:3051263"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..495
/gene="SNRPF"
/gene_synonym="SMF"
/db_xref="GeneID:6636"
/db_xref="HGNC:HGNC:11162"
/db_xref="MIM:603541"
CDS 137..397
/gene="SNRPF"
/gene_synonym="SMF"
/codon_start=1
/product="small nuclear ribonucleoprotein polypeptide F"
/protein_id="AAH02505.3"
/db_xref="GeneID:6636"
/db_xref="HGNC:HGNC:11162"
/db_xref="MIM:603541"
/translation="MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQL
ANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEEEEDGEMRE"
BASE COUNT 157 a 78 c 130 g 130 t
ORIGIN
1 gaaaggtcat agtcctgttt ggcggccatt tctcttgaaa ctgcggctcg ggacctgcgg
61 tacctgctgt agtcacgagg gacgggcggc ggcctggtcg gcagagagta gcctgcaaca
121 ttcggccgtg gttacgatga gtttacccct caatcccaaa cctttcctca atggactaac
181 aggaaagcca gtgatggtga aacttaagtg gggaatggag tacaagggct atctggtatc
241 tgtagatggc tacatgaaca tgcagcttgc aaatacagaa gaatacatag atggagcttt
301 gtctggacat ctgggtgaag ttttaataag gtgtaataat gtcctttata tcagaggtgt
361 ggaagaagag gaagaagatg gggaaatgag agaatagcat cttttgtggg ggattttttt
421 tatatatatt tctagacaat aaagatttgt ttgtttttca acttgaaaaa aaaaaaaaaa
481 aaaaaaaaaa aaaaa
//