LOCUS BC002487 1508 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens tumor susceptibility gene 101, mRNA (cDNA clone MGC:1317 IMAGE:3350039), complete cds. ACCESSION BC002487 VERSION BC002487.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1508) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1508) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: p Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18765712. FEATURES Location/Qualifiers source 1..1508 /db_xref="H-InvDB:HIT000030933" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1317 IMAGE:3350039" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1508 /gene="TSG101" /gene_synonym="VPS23" /db_xref="GeneID:7251" /db_xref="HGNC:HGNC:15971" /db_xref="MIM:601387" CDS 85..1257 /gene="TSG101" /gene_synonym="VPS23" /codon_start=1 /product="tumor susceptibility gene 101" /protein_id="AAH02487.1" /db_xref="GeneID:7251" /db_xref="HGNC:HGNC:15971" /db_xref="MIM:601387" /translation="MAVSESQLKKMVSKYKYRDLTVRETVNVITLYKDLKPVLDSYVF NDGSSRELMNLTGTIPVPYRGNTYNIPICLWLLDTYPYNPPICFVKPTSSMTIKTGKH VDANGKIYLPYLHEWKHPQSDLLGLIQVMIVVFGDEPPVFSRPISASYPPYQATGPPN TSYMPGMPGGISPYPSGYPPNPSGYPGCPYPPGGPYPATTSSQYPSQPPVTTVGPSRD GTISEDTIRASLISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTR LDQEVAEVDKNIELLKKKDEELSSALEKMENQSENNDIDEVIIPTAPLYKQILNLYAE ENAIEDTILYLGEALRRGVIDLDVFLKHVRLLSRKQFQLRALMQKARKTAGLSDLY" BASE COUNT 441 a 340 c 326 g 401 t ORIGIN 1 tgtgcgattg tgtgggacgg tctggggcag cccagcagcg gctgaccctc tgcctgcggg 61 gaagggagtc gccaggcggc cgtcatggcg gtgtcggaga gccagctcaa gaaaatggtg 121 tccaagtaca aatacagaga cctaactgta cgtgaaactg tcaatgttat tactctatac 181 aaagatctca aacctgtttt ggattcatat gtttttaacg atggcagttc cagggaacta 241 atgaacctca ctggaacaat ccctgtgcct tatagaggta atacatacaa tattccaata 301 tgcctatggc tactggacac atacccatat aatcccccta tctgttttgt taagcctact 361 agttcaatga ctattaaaac aggaaagcat gttgatgcaa atgggaagat atatcttcct 421 tatctacatg aatggaaaca cccacagtca gacttgttgg ggcttattca ggtcatgatt 481 gtggtatttg gagatgaacc tccagtcttc tctcgtccta tttcggcatc ctatccgcca 541 taccaggcaa cggggccacc aaatacttcc tacatgccag gcatgccagg tggaatctct 601 ccatacccat ccggataccc tcccaatccc agtggttacc caggctgtcc ttacccacct 661 ggtggtccat atcctgccac aacaagttct cagtaccctt ctcagcctcc tgtgaccact 721 gttggtccca gtagggatgg cacaatcagc gaggacacca tccgagcctc tctcatctct 781 gcggtcagtg acaaactgag atggcggatg aaggaggaaa tggatcgtgc ccaggcagag 841 ctcaatgcct tgaaacgaac agaagaagac ctgaaaaagg gtcaccagaa actggaagag 901 atggttaccc gtttagatca agaagtagcc gaggttgata aaaacataga acttttgaaa 961 aagaaggatg aagaactcag ttctgctctg gaaaaaatgg aaaatcagtc tgaaaacaat 1021 gatatcgatg aagttatcat tcccacagct cccttataca aacagatcct gaatctgtat 1081 gcagaagaaa acgctattga agacactatc ctttacttgg gagaagcctt gagaaggggc 1141 gtgatagacc tggatgtctt cctgaagcat gtacgtcttc tgtcccgtaa acagttccag 1201 ctgagggcac taatgcaaaa agcaagaaag actgccggtc tcagtgacct ctactgactt 1261 ctctgatacc agctggaggt tgagctcttc ttaaagtatt cttctcttcc ttttatcagt 1321 aggtgcccag aataagttat tgcagtttat cattcaagtg taaaatattt tgaatcaata 1381 atatattttc tgttttcttt tggtaaagac tggcttttat taatgcactt tctatcctct 1441 gtaaactttt tgtgctgaat gttgggactg ctaaataaaa tttgttgcat aaaaaaaaaa 1501 aaaaaaaa //