LOCUS BC002468 2047 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens prickle homolog 3 (Drosophila), mRNA (cDNA clone
MGC:1924 IMAGE:3347651), complete cds.
ACCESSION BC002468
VERSION BC002468.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2047)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2047)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002468.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: b Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7710128.
FEATURES Location/Qualifiers
source 1..2047
/db_xref="H-InvDB:HIT000050407"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1924 IMAGE:3347651"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2047
/gene="PRICKLE3"
/db_xref="GeneID:4007"
/db_xref="HGNC:HGNC:6645"
/db_xref="MIM:300111"
CDS 57..1904
/gene="PRICKLE3"
/codon_start=1
/product="prickle homolog 3 (Drosophila)"
/protein_id="AAH02468.1"
/db_xref="GeneID:4007"
/db_xref="HGNC:HGNC:6645"
/db_xref="MIM:300111"
/translation="MFARGSRRRRSGRAPPEAEDPDRGQPCNSCREQCPGFLLHGWRK
ICQHCKCPREEHAVHAVPVDLERIMCRLISDFQRHSISDDDSGCASEEYAWVPPGLKP
EQVYQFFSCLPEDKVPYVNSPGEKYRIKQLLHQLPPHDSEAQYCTALEEEEKKELRAF
SQQRKRENLGRGIVRIFPVTITGAICEECGKQIGGGDIAVFASRAGLGACWHPQCFVC
TTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQACDEIIFSPECTEAEGRHWHMDHF
CCFECEASLGGQRYVMRQSRPHCCACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWHA
SDRCFCCSRCGRALLGRPFLPRRGLIFCSRACSLGSEPTAPGPSRRSWSAGPVTAPLA
ASTASFSAVKGASETTTKGTSTELAPATGPEEPSRFLRGAPHRHSMPELGLRSVPEPP
PESPGQPNLRPDDSAFGRQSTPRVSFRDPLVSEGGPRRTLSAPPAQRRRPRSPPPRAP
SRRRHHHHNHHHHHNRHPSRRRHYQCDAGSGSDSESCSSSPSSSSSESSEDDGFFLGE
RIPLPPHLCRPMPAQDTAMETFNSPSLSLPRDSRAGMPRQARDKNCIVA"
BASE COUNT 404 a 701 c 579 g 363 t
ORIGIN
1 gtcgcaagga ttacattcgc ctgacccggc ccggcttgac cctgcccggg cgcgccatgt
61 tcgcgcgtgg gtcccggagg cgccgctccg ggcgtgcgcc tccagaggca gaggacccag
121 accggggcca gccctgcaac tcctgtaggg agcagtgccc tggcttcctg ctccacggct
181 ggagaaagat ctgccagcat tgcaaatgcc cgcgggagga gcatgcagtg cacgcggtgc
241 ctgtggacct ggaacgcatc atgtgtcggc taatctcgga cttccagcgc cactccatct
301 ccgacgacga ctcaggctgt gcatcggagg agtatgcctg ggtgccccca ggccttaagc
361 cggagcaggt atatcaattt ttcagctgcc tcccagagga caaggtcccc tacgtcaaca
421 gtcctgggga gaaatacagg atcaagcagc tgctgcacca gctgccccca cacgacagtg
481 aggcacagta ctgcacagca ctggaagagg aggaaaagaa agagctccga gcctttagcc
541 agcagcggaa gcgggagaat ctggggcgtg gcatcgtgcg catcttcccg gtgaccatca
601 ctggggccat ctgtgaggag tgcggaaagc agattggagg tggggacatc gcagtgtttg
661 ccagccgtgc aggcctgggt gcctgctggc acccacagtg cttcgtgtgt accacgtgcc
721 aggaactgct ggttgacctc atctacttct accatgttgg caaggtctac tgcgggcgtc
781 accatgccga atgcctgcgt ccacgctgcc aagcctgtga cgagatcatc ttctcccctg
841 agtgcacgga ggctgagggc cgccactggc acatggatca cttctgctgc tttgagtgtg
901 aagcttcact aggagggcag cgctatgtca tgcgtcagag ccgcccccac tgctgcgcct
961 gctacgaggc ccgccacgcg gagtactgtg atggctgtgg ggagcacatc ggcctggacc
1021 aaggccagat ggcttacgag ggccagcact ggcatgcctc agaccgctgc ttctgctgta
1081 gtcgctgtgg gcgggccctg ctgggccgcc cattcctgcc acgccgaggc ctaatcttct
1141 gctctcgagc ctgcagcctt gggtccgagc ccacagctcc agggccgagc cgccgcagct
1201 ggagtgccgg ccctgtcaca gccccacttg cagcctccac agcctctttc tctgctgtga
1261 agggggcatc agagaccacc accaaaggca ccagcacaga gttagcgcca gctacaggcc
1321 ctgaggagcc ctcccgcttt ctgagagggg ctccccaccg ccactccatg ccggaactgg
1381 ggctccgcag tgtccccgag ccgcccccag agtcccccgg ccagcctaac ctgcgcccag
1441 atgatagtgc cttcggtcgt cagagcaccc cacgcgtcag cttccgcgac cctctggtgt
1501 ctgaaggagg cccgcgccgg accctgagtg cacccccggc ccagcgccgc aggccacgca
1561 gtcccccacc cagggccccc agccgtcgcc gccaccatca tcataatcac catcaccatc
1621 acaaccgcca cccaagcaga cgtcgccact atcaatgtga cgcgggatca gggtcagact
1681 cggaatcttg ctccagctcg ccctccagtt ccagttccga atcatcagag gatgatggct
1741 tcttcctagg agagcgcatc cctctgcccc cgcatttgtg caggcccatg cctgctcagg
1801 acactgcaat ggagaccttc aactccccat ctttatcgct ccccagggac tctcgcgcag
1861 ggatgcctcg tcaggcccga gacaagaact gcatcgtggc ttgaaggcag gccgtcctgg
1921 agggggctcc attctccagt cagagtagat gatgaggccc atgcccctca cccccacgcc
1981 ccgcccctac aacctaagtc ataaatcctc ttcctccctc ctttaaaaaa aaaaaaaaaa
2041 aaaaaaa
//