LOCUS BC002461 2409 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 2, mRNA
(cDNA clone MGC:1529 IMAGE:3343559), complete cds.
ACCESSION BC002461
VERSION BC002461.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2409)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2409)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002461.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: n Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4757855.
FEATURES Location/Qualifiers
source 1..2409
/db_xref="H-InvDB:HIT000030911"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1529 IMAGE:3343559"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2409
/gene="BNIP2"
/gene_synonym="BNIP-2"
/gene_synonym="NIP2"
/db_xref="GeneID:663"
/db_xref="MIM:603292"
CDS 243..1187
/gene="BNIP2"
/gene_synonym="BNIP-2"
/gene_synonym="NIP2"
/codon_start=1
/product="BNIP2 protein"
/protein_id="AAH02461.1"
/db_xref="GeneID:663"
/db_xref="MIM:603292"
/translation="MEGVELKEEWQDEDFPIPLPEDDSIEADILAITGPEDQPGSLEV
NGNKVRKKLMAPDISLTLDPSDGSVLSDDLDESGEIDLDGLDTPSENSNEFEWEDDLP
KPKTTEVIRKGSITEYTAAEEKEDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYY
GDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRR
KMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAVTRPFISSKFSQKIRYVF
NLAELAELVPMEYVGIPECIKQVDQELNGKQDEPKNEQ"
misc_feature 753..1127
/gene="BNIP2"
/gene_synonym="BNIP-2"
/gene_synonym="NIP2"
/note="SEC14; Region: Domain in homologues of a S.
cerevisiae phosphatidylinositol transfer protein (Sec14p)"
/db_xref="CDD:smart00516"
BASE COUNT 749 a 395 c 522 g 743 t
ORIGIN
1 ctgtgtccgg gtcagctgct gccgccgacg ccgtaccgct gcggccgggg gattgggccg
61 gggtctccac cgccgaccga ggggagcggg ctccgctcgg ccctgctttt tgcgacctgg
121 ccgtcagccc cacgtcgccg gcctggaggg gcgaagagga cgagggggcc aaggcttcct
181 ccggggacat tggctccctg gattatcaag agtttgtagt tgacattgaa tccaggctga
241 ggatggaagg tgtggaactt aaagaagaat ggcaagatga agattttccg atacctttac
301 cagaagatga tagtattgaa gcagatatac tagctataac tggaccagag gaccagcctg
361 gctcactaga agttaatgga aataaagtga gaaagaaact aatggctcca gacattagcc
421 tgacactgga tcctagtgat ggctctgtat tgtcagatga tttggatgaa agtggggaga
481 ttgacttaga tggcttagac acaccgtcag agaatagtaa tgagtttgag tgggaagatg
541 atcttccaaa acccaagact actgaagtaa ttaggaaagg ctcaattact gaatacacag
601 cagcagagga aaaagaagat ggacgacgct ggcgtatgtt caggattgga gaacaggacc
661 acagggttga tatgaaggca attgaaccct ataaaaaagt tatcagccat gggggatatt
721 atggggatgg attaaatgcc attgttgtgt ttgctgtctg tttcatgcct gaaagtagtc
781 agcctaacta tagatacctg atggacaatc tttttaaata tgttattggc actttggagc
841 tattagtagc agaaaactac atgatagttt atttaaatgg tgcaacaact cgaagaaaaa
901 tgcccagtct gggatggctc aggaaatgtt atcagcaaat tgatagaagg ttacggaaaa
961 atctaaaatc cctaatcatt gtacatcctt cttggtttat cagaacactt ctggctgtta
1021 caagaccatt tattagctcg aaattcagcc aaaaaattag atacgtgttt aatttggcag
1081 aactagcaga acttgtcccc atggaatacg ttggcatacc agaatgcata aaacaagttg
1141 atcaagaact taatggaaaa caagatgaac cgaaaaatga acagtaagtt tggcatctag
1201 tccaaacaag actgaagaat gtgctgatgg agcagtgctg tttctgcatt cataatgcat
1261 ttattggccc atatttttat gtaacctgtt acaaaataga cttgactttt tcataatgga
1321 cttttgtatt atacaaggga ctgttcactg ctgtactggt ttgcaaattt cttgaattta
1381 gctctttaat agctaactgt attattatcg ttttatattt tatattgcta aatagagaac
1441 cacactttat ataaagtagt ttttgcattt gtttattgaa tgatgcatct tcttcggtga
1501 aatatttata tgcataaatg gcaaaggaaa gaaataatat atatttttat gtcattgagc
1561 aatatttttt aatgtgtacc tgtcttatgg aagaaatatg caggtatata agaccacgat
1621 tttctaaagt gcatattaga atttttgttt ttgtaaatgg ttaaatacat ttcctgggta
1681 acttaggaaa ttaagttttt cataaggcaa cagatggtta aactgattgt catgaatacc
1741 caaagatcat gtatataatc gaagtgtatt agtaccatcc caaggttttt ttctcattta
1801 acacatttgt ttcataattc agcaagtaca gatgcaagcg cattgcacac tttttccttt
1861 ctaaacttaa agacaagtca aaaagccatt cttagaacta gaggatttaa gagggtagga
1921 attagggttt gtatatatgt atatatggga cattttatct tctggcccaa agtcagaact
1981 ttataaaaat cttgagtttg ttcactaatg tgaaataagc tatgtgtcca gggtattgct
2041 cccctgagtg tatatgagtg ctgagtagta ttgcagagaa tgtgatgagt tattcactgt
2101 cacaactttt tctatagaaa acaggggctg ctttttaaac tctcactatg ggcactttac
2161 caaaatactt ccatatcaat tatttgaact cggtagttgt ttgacctagt tagatgtggt
2221 gtttattcaa gtttgtatga aatcatgttt gacaatactg taaattaggt taattttgta
2281 agtcttagca tcatcatatt gtgctgtttt ggataacacg tttgttacaa gcatttaaac
2341 tgtttcattt ggtagtacct ttacattgaa ataaattgtg tttgtgcctc caaaaaaaaa
2401 aaaaaaaaa
//