LOCUS BC002459 1805 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fusion (involved in t(12;16) in malignant
liposarcoma), mRNA (cDNA clone MGC:3068 IMAGE:3345294), complete
cds.
ACCESSION BC002459
VERSION BC002459.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1805)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1805)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: l Column: 19.
FEATURES Location/Qualifiers
source 1..1805
/db_xref="H-InvDB:HIT000030909"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3068 IMAGE:3345294"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1805
/gene="FUS"
/gene_synonym="FUS-CHOP"
/gene_synonym="FUS1"
/gene_synonym="TLS"
/db_xref="GeneID:2521"
/db_xref="HGNC:HGNC:4010"
/db_xref="MIM:137070"
CDS 41..1621
/gene="FUS"
/gene_synonym="FUS-CHOP"
/gene_synonym="FUS1"
/gene_synonym="TLS"
/codon_start=1
/product="fusion (involved in t(12;16) in malignant
liposarcoma)"
/protein_id="AAH02459.1"
/db_xref="GeneID:2521"
/db_xref="HGNC:HGNC:4010"
/db_xref="MIM:137070"
/translation="MASNDYTQQATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQS
TDTSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQ
QPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQ
YNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGR
GGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHD
SEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLK
GEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPM
GRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAP
KPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGP
GKMDSRGEHRQDRRERPY"
BASE COUNT 435 a 414 c 588 g 368 t
ORIGIN
1 gaacttcgtt gcttgcttgc ctgtgcgcgc gtgcgcggac atggcctcaa acgattatac
61 ccaacaagca acccaaagct atggggccta ccccacccag cccgggcagg gctattccca
121 gcagagcagt cagccctacg gacagcagag ttacagtggt tatagccagt ccacggacac
181 ttcaggctat ggccagagca gctattcttc ttatggccag agccagaaca caggctatgg
241 aactcagtca actccccagg gatatggctc gactggcggc tatggcagta gccagagctc
301 ccaatcgtct tacgggcagc agtcctccta tcctggctat ggccagcagc cagctcccag
361 cagcacctcg ggaagttacg gtagcagttc tcagagcagc agctatgggc agccccagag
421 tgggagctac agccagcagc ctagctatgg tggacagcag caaagctatg gacagcagca
481 aagctataat ccccctcagg gctatggaca gcagaaccag tacaacagca gcagtggtgg
541 tggaggtgga ggtggaggtg gaggtaacta tggccaagat caatcctcca tgagtagtgg
601 tggtggcagt ggtggcggtt atggcaatca agaccagagt ggtggaggtg gcagcggtgg
661 ctatggacag caggaccgtg gaggccgcgg caggggtggc agtggtggcg gcggcggcgg
721 cggcggtggt ggttacaacc gcagcagtgg tggctatgaa cccagaggtc gtggaggtgg
781 ccgtggaggc agaggtggca tgggcggaag tgaccgtggt ggcttcaata aatttggtgg
841 ccctcgggac caaggatcac gtcatgactc cgaacaggat aattcagaca acaacaccat
901 ctttgtgcaa ggcctgggtg agaatgttac aattgagtct gtggctgatt acttcaagca
961 gattggtatt attaagacaa acaagaaaac gggacagccc atgattaatt tgtacacaga
1021 cagggaaact ggcaagctga agggagaggc aacggtctct tttgatgacc caccttcagc
1081 taaagcagct attgactggt ttgatggtaa agaattctcc ggaaatccta tcaaggtctc
1141 atttgctact cgccgggcag actttaatcg gggtggtggc aatggtcgtg gaggccgagg
1201 gcgaggagga cccatgggcc gtggaggcta tggaggtggt ggcagtggtg gtggtggccg
1261 aggaggattt cccagtggag gtggtggcgg tggaggacag cagcgagctg gtgactggaa
1321 gtgtcctaat cccacctgtg agaatatgaa cttctcttgg aggaatgaat gcaaccagtg
1381 taaggcccct aaaccagatg gcccaggagg gggaccaggt ggctctcaca tggggggtaa
1441 ctacggggat gatcgtcgtg gtggcagagg aggctatgat cgaggcggct accggggccg
1501 cggcggggac cgtggaggct tccgaggggg ccggggtggt ggggacagag gtggctttgg
1561 ccctggcaag atggattcca ggggtgagca cagacaggat cgcagggaga ggccgtatta
1621 attagcctgg ctccccaggt tctggaacag ctttttgtcc tgtacccagt gttaccctcg
1681 ttattttgta accttccaat tcctgatcac ccaagggttt ttttgtgtcg gactatgtaa
1741 ttgtaactat acctctggtt cccattaaaa gtgaccattt tagttaaaaa aaaaaaaaaa
1801 aaaaa
//