LOCUS BC002445 2455 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens carnitine palmitoyltransferase 2, mRNA (cDNA clone
MGC:1771 IMAGE:3346025), complete cds.
ACCESSION BC002445
VERSION BC002445.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2455)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2455)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002445.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: o Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503022.
FEATURES Location/Qualifiers
source 1..2455
/db_xref="H-InvDB:HIT000030898"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1771 IMAGE:3346025"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2455
/gene="CPT2"
/gene_synonym="CPTASE"
/db_xref="GeneID:1376"
/db_xref="HGNC:HGNC:2330"
/db_xref="MIM:600650"
CDS 125..2101
/gene="CPT2"
/gene_synonym="CPTASE"
/codon_start=1
/product="carnitine palmitoyltransferase 2"
/protein_id="AAH02445.1"
/db_xref="GeneID:1376"
/db_xref="HGNC:HGNC:2330"
/db_xref="MIM:600650"
/translation="MVPRLLLRAWPRGPAVGPGAPSRPLSAGSGPGQYLQRSIVPTMH
YQDSLPRLPIPKLEDTIRRYLSAQKPLLNDGQFRKTEQFCKSFENGIGKELHEQLVAL
DKQNKHTSYILGPWFDMYLSARDSVVLNFNPFMAFNPDPKSEYNDQLTRATNMTVSAI
RFLKTLRAGLLEPEVFHLNPAKSDTITFKRLIRFVPSSLSWYGAYLVNAYPLDMSQYF
RLFNSTRLPKPSRDELFTDDKARHLLVLRKGNFYIFDVLDQDGNIVSPSEIQAHLKYI
LSDSSPAPEFPLAYLTSENRDIWAELRQKLMSSGNEESLRKVDSAVFCLCLDDFPIKD
LVHLSHNMLHGDGTNRWFDKSFNLIIAKDGSTAIHFEHSWGDGVAVLRFFNEVFKDST
QTPAVTPQSQPATTDSTVTVQKLNFELTDALKTGITAAKEKFDATMKTLTIDCVQFQR
GGKEFLKKQKLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASVY
TKRCSEAFVREPSRHSAGELQQMMVECSKYHGQLTKEAAMGQGFDRHLFALRHLAAAK
GIILPELYLDPAYGQINHNVLSTSTLSSPAVNLGGFAPVVSDGFGVGYAVHDNWIGCN
VSSYPGRNAREFLQCVEKALEDVFDALEGKSIKS"
BASE COUNT 602 a 670 c 629 g 554 t
ORIGIN
1 gggcggagaa gtgcctcagg agtcctgacg cagtgtcttg ggcgctaacg gcggcggcgg
61 ccttgtgttt agactccaga actccccact tgccgcgttc tcgccgccgc aggctcccgg
121 gacgatggtg ccccgcctgc tgctgcgcgc ctggccccgg ggccccgcgg ttggtccggg
181 agcccccagt cggcccctca gcgccggctc cgggcccggc cagtacctgc agcgcagcat
241 cgtgcccacc atgcactacc aggacagcct gcccaggctg cctattccca aacttgaaga
301 caccattagg agatacctca gtgcacagaa gcctctcttg aatgatggcc agttcaggaa
361 aacagaacaa ttttgcaaga gttttgaaaa tgggattgga aaagaactgc atgagcagct
421 ggttgctctg gacaaacaga ataaacatac aagctacatt ttgggaccct ggtttgatat
481 gtacctatct gctcgagact ccgttgttct gaactttaat ccatttatgg ctttcaatcc
541 tgacccaaaa tctgagtata atgaccagct cacccgggca accaacatga ctgtttctgc
601 catccggttt ctgaagacac tccgggctgg ccttctggag ccagaagtgt tccacttgaa
661 ccctgcaaaa agtgacacta tcaccttcaa gagactcata cgctttgtgc cttcctctct
721 gtcctggtat ggggcctacc tggtcaatgc gtatcccctg gatatgtccc agtattttcg
781 gcttttcaac tcaactcgtt tacccaaacc cagtcgggat gaactcttca ctgatgacaa
841 ggccagacac ctcctggtcc taaggaaagg aaatttttat atctttgatg tcctggatca
901 agatgggaac attgtgagcc cctcggaaat ccaggcacat ctgaagtaca ttctctcaga
961 cagcagcccc gcccccgagt ttcccctggc atacctgacc agtgagaacc gagacatctg
1021 ggcagagctc aggcagaagc tgatgagtag tggcaatgag gagagcctga ggaaagtgga
1081 ctcggcagtg ttctgtctct gcctagatga cttccccatt aaggaccttg tccacttgtc
1141 ccacaatatg ctgcatgggg atggcacaaa ccgctggttt gataaatcct ttaacctcat
1201 tatcgccaag gatggctcta ctgccatcca ctttgagcac tcttggggtg atggtgtggc
1261 agtgctcaga ttttttaatg aagtatttaa agacagcact cagacccctg ccgtcactcc
1321 acagagccag ccagctacca ctgactctac tgtcacggtg cagaaactca acttcgagct
1381 gactgatgcc ttaaagactg gcatcacagc tgctaaggaa aagtttgatg ccaccatgaa
1441 aaccctcact attgactgcg tccagtttca gagaggaggc aaagaattcc tgaagaagca
1501 aaagctgagc cctgacgcag ttgcccagct ggcattccag atggccttcc tgcggcagta
1561 cgggcagaca gtggccacct acgagtcctg tagcactgcc gcattcaagc acggccgcac
1621 tgagaccatc cgcccggcct ccgtctatac aaagaggtgc tctgaggcct ttgtcaggga
1681 gccctccagg cacagtgctg gtgagcttca gcagatgatg gttgagtgct ccaagtacca
1741 tggccagctg accaaagaag cagcaatggg ccagggcttt gaccgacact tgtttgctct
1801 gcggcatctg gcagcagcca aagggatcat cttgcctgag ctctacctgg accctgcata
1861 cgggcagata aaccacaatg tcctgtccac gagcacactg agcagcccag cagtgaacct
1921 tgggggcttt gcccctgtgg tctctgatgg ctttggtgtt gggtatgctg ttcatgacaa
1981 ctggataggc tgcaatgtct cttcctaccc aggccgcaat gcccgggagt ttctccaatg
2041 tgtggagaag gccttagaag acgtgtttga tgccttagaa ggcaaatcca tcaaaagtta
2101 acttctgggc agatgaaaag ctaccatcac ttcctcatca tgaaaactgg gaggccgggc
2161 atggtggctc atgcctgtaa tcccagcatt ttgagaggct gaggcgggtg gatcacttga
2221 ggtcaggagt ttgagaccaa cctggccaac atggtgaaac cttgtctcta ctaaaaatac
2281 aaaaattagc tgggtgtggt ggcatgtgcc tataatccca gctacttggg aggttgaagc
2341 agaattgctt gaacccagga ggtggaggtt gcagtgagct gagatcacac cactgcactc
2401 cggcctgggc gacagagcga gactgtctca aaaaaacaaa aaaaaaaaaa aaaaa
//