LOCUS BC002436 1403 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens syntaxin 4, mRNA (cDNA clone MGC:1480 IMAGE:3345863),
complete cds.
ACCESSION BC002436
VERSION BC002436.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1403)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1403)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC002436.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: i Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147603.
FEATURES Location/Qualifiers
source 1..1403
/db_xref="H-InvDB:HIT000030890"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1480 IMAGE:3345863"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1403
/gene="STX4"
/gene_synonym="p35-2"
/db_xref="GeneID:6810"
/db_xref="HGNC:HGNC:11439"
/db_xref="MIM:186591"
CDS 225..1118
/gene="STX4"
/gene_synonym="p35-2"
/codon_start=1
/product="syntaxin 4"
/protein_id="AAH02436.1"
/db_xref="GeneID:6810"
/db_xref="HGNC:HGNC:11439"
/db_xref="MIM:186591"
/translation="MRDRTHELRQGDDSSDEEDKERVALVVHPGTARLGSPDEEFFHK
VRTIRQTIVKLGNKVQELEKQQVTILATPLPEESMKQELQNLRDEIKQLGREIRLQLK
AIEPQKEEADENYNSVNTRMRKTQHGVLSQQFVELINKCNSMQSEYREKNVERIRRQL
KITNAGMVSDEELEQMLDSGQSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIR
ELHDIFTFLATEVEMQGEMINRIEKNILSSADYVERGQEHVKTALENQKKARKKKVLI
AICVSITVVLLAVIIGVTVVG"
BASE COUNT 360 a 337 c 462 g 244 t
ORIGIN
1 gggaagaaaa gggaattcca acctgtggaa ccttgggggg tccccggggt cggcgccttc
61 ccattgactg tgggcggtgc aagggacgga gcctctggcg gctcgtgggg gtgttggggt
121 ccgcaggggg agggagggga gtgtcagagt gtgagcgggg tacgggaatt ccaaatttga
181 gggcctcccg gctctggcgc cggggaggga gagctcaggc cgccatgcgg gacaggaccc
241 acgagctgag acagggggat gacagctcgg acgaagagga caaggagcgg gtcgcgctgg
301 tggtgcaccc gggcacggca cggctgggga gcccggacga ggagttcttc cacaaggtcc
361 ggacaattcg gcagactatt gtcaaactgg ggaataaagt ccaggagttg gagaaacagc
421 aggtcaccat cctggccacg ccccttcccg aggagagcat gaagcaggag ctgcagaacc
481 tgcgcgatga gatcaaacag ctggggaggg agatccgcct gcagctgaag gccatagagc
541 cccagaagga ggaagctgat gagaactata actccgtcaa cacaagaatg agaaaaaccc
601 agcatggggt cctgtcccag caattcgtgg agctcatcaa caagtgcaat tcaatgcagt
661 ccgaataccg ggagaagaac gtggagcgga ttcggaggca gctgaagatc accaatgctg
721 ggatggtgtc tgatgaggag ttggagcaga tgctggacag tgggcaaagc gaggtgtttg
781 tgtccaatat cctgaaggac acgcaggtga ctcgacaggc cttaaatgag atctcggccc
841 ggcacagtga gatccagcag cttgaacgca gtattcgtga gctgcacgac atattcactt
901 ttctggctac cgaagtggag atgcaggggg agatgatcaa tcggattgag aagaacatcc
961 tgagctcagc ggactacgtg gaacgtgggc aggagcacgt caagacggcc ctggagaacc
1021 agaagaaggc gaggaagaag aaagtcttga ttgccatctg tgtgtccatc accgtcgtcc
1081 tcctagcagt catcattggc gtcacagtgg ttggataatg tcgcacattg ttggcactag
1141 gagcaccagg aacccagggc ctggccttct ctcccagcag cctggggggc agggcagagc
1201 ctccagtcgg accccttcct cacactggcc cctatgcaga agggcagaca gttcttctgg
1261 ggttggcagc tgctcattca tgatggcctc ctccttcagg cctcaatgcc tgggggaggc
1321 ctgcactgtc ctgattggcc gggacacacg gttttgtaaa aaattaaaaa acaaaaaaag
1381 agcataaaaa aaaaaaaaaa aaa
//