LOCUS BC002395 1797 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens splicing factor 3a, subunit 3, 60kDa, mRNA (cDNA clone MGC:8445 IMAGE:2821350), complete cds. ACCESSION BC002395 VERSION BC002395.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1797) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1797) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Nov 6, 2003 this sequence version replaced BC002395.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: f Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 54112115. FEATURES Location/Qualifiers source 1..1797 /db_xref="H-InvDB:HIT000030858" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8445 IMAGE:2821350" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1797 /gene="SF3A3" /gene_synonym="PRP9" /gene_synonym="PRPF9" /gene_synonym="SAP61" /gene_synonym="SF3a60" /db_xref="GeneID:10946" /db_xref="HGNC:HGNC:10767" /db_xref="MIM:605596" CDS 39..1544 /gene="SF3A3" /gene_synonym="PRP9" /gene_synonym="PRPF9" /gene_synonym="SAP61" /gene_synonym="SF3a60" /codon_start=1 /product="splicing factor 3a, subunit 3, 60kDa" /protein_id="AAH02395.1" /db_xref="GeneID:10946" /db_xref="HGNC:HGNC:10767" /db_xref="MIM:605596" /translation="METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTR AMQDRYMEVSGNLRDLYDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEI CVPMSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDY ITYLSIFDQLFDIPKERKNAEYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQAEFE KKWENGTFPGWPKETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGG TLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTKRDTERNKDIAFLEAQIYEYVEIL GEQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPI PYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVT QIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL" BASE COUNT 564 a 363 c 450 g 420 t ORIGIN 1 gttggtggtc tgaattgaga agccgcgact aagggaagat ggagacaata ctggagcagc 61 agcggcgcta tcatgaggag aaggaacggc tcatggacgt catggctaaa gagatgctca 121 ccaagaagtc cacgctccgg gaccagatca attctgatca ccgcactcgg gccatgcaag 181 ataggtatat ggaggtcagt gggaacctga gggatttgta tgatgataag gatggattac 241 gaaaggagga gctcaatgcc atttcaggac ccaatgagtt tgctgaattc tataatagac 301 tcaagcaaat aaaggaattc caccggaagc acccaaatga gatctgtgtg ccaatgtcag 361 tggaatttga ggaactcctg aaggctcgag agaatccaag tgaagaggca caaaacttgg 421 tggagttcac agatgaagag ggatatggtc gttatctcga tctccatgac tgttacctca 481 agtacattaa cctgaaggca tctgagaagc tggattatat cacatacctg tccatctttg 541 accaattatt tgacattcct aaagaaagga agaatgcaga gtataagaga tacctagaga 601 tgctgcttga gtaccttcag gattacacag atagagtgaa gcctctccaa gatcagaatg 661 aactttttgg gaagattcag gctgagtttg agaagaaatg ggagaatggg acctttcctg 721 gatggccgaa agagacaagc agtgccctga cccatgctgg agcccatctt gacctctctg 781 cattctcctc ctgggaggag ttggcttctc tgggtttgga cagattgaaa tctgctctct 841 tagctttagg cttgaaatgt ggcgggaccc tagaagagcg agcccagaga ctattcagta 901 ccaaaggaaa gtccctggag tcacttgata cctctttgtt tgccaaaaat cccaagtcaa 961 agggcaccaa gcgagacact gaaaggaaca aagacattgc ttttctagaa gcccagatct 1021 atgaatatgt agagattctc ggggaacagc gacatctcac tcatgaaaat gtacagcgca 1081 agcaagccag gacaggagaa gagcgagaag aagaggaaga agagcagatc agtgagagtg 1141 agagtgaaga tgaagagaac gagatcattt acaaccccaa aaacctgcca cttggctggg 1201 atggcaaacc tattccctac tggctgtata agcttcatgg cctaaatatc aactacaact 1261 gtgagatttg tggaaactac acctaccgag ggcccaaagc cttccagcga cactttgctg 1321 aatggcgtca tgctcatggc atgaggtgtt tgggcatccc aaacactgct cactttgcta 1381 atgtgacaca gattgaagat gctgtctcct tgtgggccaa actgaaattg cagaaggctt 1441 cagaacgatg gcagcctgac actgaggaag aatatgaaga ctcaagtggg aatgttgtga 1501 ataagaagac atacgaggat ctgaaaagac aaggactgct ctagtgttga gggatgtagc 1561 tcagcttttg ggctagccca ggcttcccta agatctgctt tttctatttc tcccaaccaa 1621 atcctcttaa agaccctttg ctatgtagtc tcatggtcta gcatgcatct tgtagaaaca 1681 aggcatgctg gcagattgca gggttgagat gtgttttatc tgttttatat tttaaaagat 1741 tctgccagaa aataaaacca gaccttgttc taaaaaaaaa aaaaaaaaaa aaaaaaa //