LOCUS BC002383 2329 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 9, mRNA (cDNA clone MGC:8644 IMAGE:2961610), complete
cds.
ACCESSION BC002383
VERSION BC002383.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2329)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2329)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002383.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: n Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34335280.
FEATURES Location/Qualifiers
source 1..2329
/db_xref="H-InvDB:HIT000030848"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8644 IMAGE:2961610"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2329
/gene="PSMD9"
/gene_synonym="MGC8644"
/gene_synonym="p27"
/db_xref="GeneID:5715"
/db_xref="HGNC:HGNC:9567"
/db_xref="MIM:603146"
CDS 87..758
/gene="PSMD9"
/gene_synonym="MGC8644"
/gene_synonym="p27"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 9"
/protein_id="AAH02383.1"
/db_xref="GeneID:5715"
/db_xref="HGNC:HGNC:9567"
/db_xref="MIM:603146"
/translation="MSDEEARQSGGSSQAGVVTVSDVQELMRRKEEIEAQIKANYDVL
ESQKGIGMNEPLVDCEGYPRSDVDLYQVRTARHNIICLQNDHKAVMKQVEEALHQLHA
RDKEKQARDMAEAHKEAMSRKLGQSESQGPPRAFAKVNSISPGSPASIAGLQVDDEIV
EFGSVNTQNFQSLHNIGSVVQHSEGKPLNVTVIRRGEKHQLRLVPTRWAGKGLLGCNI
IPLQR"
BASE COUNT 540 a 581 c 613 g 595 t
ORIGIN
1 catgggcgga gccgtagtta cggtcgactg gggcgtcgtc cctagcccgg gagccgggtc
61 tctggagtcg cggcccgggg ttcacgatgt ccgacgagga agcgaggcag agcggaggct
121 cctcgcaggc cggcgtcgtg actgtcagcg acgtccagga gctgatgcgg cgcaaggagg
181 agatagaagc gcagatcaag gccaactatg acgtgctgga aagccaaaaa ggcattggga
241 tgaacgagcc gctggtggac tgtgagggct acccccggtc agacgtggac ctgtaccaag
301 tccgcaccgc caggcacaac atcatatgcc tgcagaatga tcacaaggca gtgatgaagc
361 aggtggagga ggccctgcac cagctgcacg ctcgcgacaa ggagaagcag gcccgggaca
421 tggctgaggc ccacaaagag gccatgagcc gcaaactggg tcagagtgag agccagggcc
481 ctccacgggc cttcgccaaa gtgaacagca tcagccccgg ctccccagcc agcatcgcgg
541 gtctgcaagt ggatgatgag attgtggagt tcggctctgt gaacacccag aacttccagt
601 cactgcataa cattggcagt gtggtgcagc acagtgaggg gaagcccctg aatgtgacag
661 tgatccgcag gggggaaaaa caccagctta gacttgttcc aacacgctgg gcaggaaaag
721 gactgctggg ctgcaacatt attcctctgc aaagatgatt gtccctgggg aacagtaaca
781 ggaaagcatc ttcccttgcc ctggacttgg gtctagggat ttccaacttg tcttctctcc
841 ctgaagcata aggatctgga agaggcttgt aacctgaact tctgtgtggt ggcagtactg
901 tggcccacca gtgtaatctc cctggattaa ggcattctta aaaacttagg cttggcctct
961 ttcacaaatt aggccacggc cctaaatagg aattccctgg attgtgggca agtgggcgga
1021 agttattctg gcaggtactg gtgtgattat tattattatt tttaataaag agttttacag
1081 tgctgatatg accctgttgt caccccagct gaatttctta tgaccctccc aaaccaaagc
1141 tcagatgggg tcagaagagc ttcatagaaa gttgggcaaa acaggctagc aattgcaaag
1201 tcaggctttg accaacatat ttctttgcac tgaggccttg ctgctgtgga tacggaaatg
1261 gttaagtact gtgcttcctc agcagctggg ctgtcagggc catagtagct ccctttggag
1321 aacagggaaa gcctggaggc ttcccaggtg gcccagcgtg gtgtcctgtc agcttcctct
1381 ttaggaaccc accagagggc agcaagctcc tttcacttcg ctagtaagaa cccctccgtt
1441 tttgtgtgtt tttgtttttg ttttctggag acaaggtctt gctttgtcac ccaggctgga
1501 gtgcagtgtc gtgatcaagg ttcactgaag ccttgacgct gtgggcactg cctcagccgc
1561 ccaagtatct gggaccacag gcgtgcacca ccatgcatag ctaatttatt ttttgtagag
1621 acagggtctc cctgtgttga ccaggttggt ctcgaactcc tgggctcaag cagtcctcct
1681 gccttggcct cctaaagtgc tgggatcaca ggcgtgagcc actgcgccca gcccactgct
1741 agtttgactt tttataattg aacctcctgg ctatgccctg agatcagcgc tattttgtaa
1801 accgctgagg tatggatagg aacgagtaga tcagacctct tgaaaatgct tattcttcct
1861 cccttttatt ttttgtctct tttaagatgg taaaatggtt ctcagggatt cctgccaata
1921 ctttgaatta ttttttcctc tccatggtat cagtgttcat ttccccagtt cttgcacacc
1981 gctttctgtt ttggcagttc tgccaggcaa gccctgtgtt ccttgggact ggttttgctg
2041 tggttggata cagataccag cttgccttga tgggattggt attgctgtgt gcttccagcc
2101 acaggttctc acactcaatt ccaaagcctt cctattgggc gaattccctc aaactctatt
2161 tgacctgaca gccatacgta ttcccctctg gtagccacag acatgctgtg tttaccaatg
2221 tttgctgttt aaattgcatg ttctaattcc acgtattttc cagtctcttt tataaagtct
2281 cagactataa taaacacagc ttgcccagtt aaaaaaaaaa aaaaaaaaa
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