LOCUS BC002367 1327 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase,
5, mRNA (cDNA clone MGC:8452 IMAGE:2821416), complete cds.
ACCESSION BC002367
VERSION BC002367.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1327)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1327)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC002367.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24497434.
FEATURES Location/Qualifiers
source 1..1327
/db_xref="H-InvDB:HIT000030834"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8452 IMAGE:2821416"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1327
/gene="PSMC5"
/gene_synonym="p45"
/gene_synonym="p45/SUG"
/gene_synonym="S8"
/gene_synonym="SUG1"
/gene_synonym="TBP10"
/gene_synonym="TRIP1"
/db_xref="GeneID:5705"
/db_xref="HGNC:HGNC:9552"
/db_xref="MIM:601681"
CDS 12..1232
/gene="PSMC5"
/gene_synonym="p45"
/gene_synonym="p45/SUG"
/gene_synonym="S8"
/gene_synonym="SUG1"
/gene_synonym="TBP10"
/gene_synonym="TRIP1"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
ATPase, 5"
/protein_id="AAH02367.3"
/db_xref="GeneID:5705"
/db_xref="HGNC:HGNC:9552"
/db_xref="MIM:601681"
/translation="MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRR
LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKN
IDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE
IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE
LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLEL
LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSR
KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ
KDSEKNMSIKKLWK"
BASE COUNT 399 a 278 c 382 g 268 t
ORIGIN
1 gaagagagaa gatggcgctt gacggaccag agcagatgga gctggaggag gggaaggcag
61 gcagcggact ccgccaatat tatctgtcca agattgaaga actccagctg attgtgaatg
121 ataagagcca aaacctccgg aggctgcagg cacagaggaa cgaactaaat gctaaagttc
181 gcctattgcg ggaggagcta cagctgctgc aggagcaggg ctcctatgtg ggggaagtag
241 tccgggccat ggataagaag aaagtgttgg tcaaggtaca tcctgaaggt aaatttgttg
301 tagacgtgga caaaaacatt gacatcaatg atgtgacacc caattgccgg gtggctctaa
361 ggaatgacag ctacactctg cacaagatcc tgcccaacaa ggtagaccca ttagtgtcac
421 tgatgatggt ggagaaagta ccagattcaa cttatgagat gattggtgga ctggacaaac
481 agatcaagga gatcaaagaa gtgatcgagc tgcctgttaa gcatcctgag ctcttcgaag
541 cactgggcat tgctcagccc aagggagtgc tgctgtatgg acctccaggc actgggaaga
601 cactgttggc ccgggctgtg gctcatcata cggactgtac ctttattcgt gtctctggct
661 ctgaactggt acagaaattc ataggggaag gggcaagaat ggtgagggag ctgtttgtca
721 tggcacggga acatgctcca tctatcatct tcatggacga aatcgactcc atcggctcct
781 cgcggctgga ggggggttct ggaggggaca gtgaagtgca gcgcacgatg ctggagttgc
841 tcaaccagct cgacggcttt gaggccacca agaacatcaa ggttatcatg gctactaata
901 ggattgatat cctggactcg gcactgcttc gcccagggcg cattgacaga aaaattgaat
961 tcccaccccc caatgaggag gcccggctgg acattttgaa gattcattct cggaagatga
1021 acctgacccg ggggatcaac ctgagaaaaa ttgctgagct catgccagga gcatcagggg
1081 ctgaagtgaa gggcgtgtgc acagaagctg gcatgtatgc cctgcgagaa cggcgagtcc
1141 atgtcactca ggaggacttt gagatggcag tagccaaggt catgcagaag gacagtgaga
1201 aaaacatgtc catcaagaaa ttatggaagt gagtggacag cctttgtgtg tatctctcca
1261 ataaagctct gtgggccaag tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaa
//