LOCUS BC002366 3235 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, mRNA (cDNA clone MGC:8416 IMAGE:2820898), complete cds. ACCESSION BC002366 VERSION BC002366.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3235) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3235) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC002366.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: d Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41327770. FEATURES Location/Qualifiers source 1..3235 /db_xref="H-InvDB:HIT000030833" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8416 IMAGE:2820898" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3235 /gene="DDX23" /gene_synonym="MGC8416" /gene_synonym="prp28" /gene_synonym="PRPF28" /gene_synonym="U5-100K" /db_xref="GeneID:9416" /db_xref="HGNC:HGNC:17347" CDS 51..2513 /gene="DDX23" /gene_synonym="MGC8416" /gene_synonym="prp28" /gene_synonym="PRPF28" /gene_synonym="U5-100K" /codon_start=1 /product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 23" /protein_id="AAH02366.1" /db_xref="GeneID:9416" /db_xref="HGNC:HGNC:17347" /translation="MAGELADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDR KRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKD RKRSSLSPGRGKDFKSRKDRDSKKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAK PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERR ERMERETNGNEDEEGRQKIREEKDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEW DASEDTSIDYNPLYKERHQVQLLGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKE QEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRS WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLL VWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISR EDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKI LEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRP AVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAK SLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYD MAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANH PDAQHKPGTILTKKRREETIFA" BASE COUNT 891 a 768 c 934 g 642 t ORIGIN 1 cgacggctcc gcgacgttga ggccgcgttg ggcggttcag actcagggtg atggcaggag 61 agctggctga caaaaaggac cgtgatgcat caccttccaa ggaggaaagg aagcgatcac 121 ggactcctga cagagagcgg gatagagacc gggaccggaa gtcttcccca tctaaagata 181 gaaagcggca tcgttcaagg gatagacgtc gaggaggcag ccgttctcgc tctcgttccc 241 gttccaaatc tgcagaaaga gaacgacggc acaaagaacg agaacgagat aaggagcggg 301 atcggaataa gaaggaccga gatcgagaca aggatgggca cagacgggac aaggaccgta 361 aacgatccag cttatctcct ggtcgaggaa aagactttaa atctcggaag gacagagact 421 ctaagaagga tgaagaggat gaacatggtg ataagaagcc taaggcccag ccattatccc 481 tggaggagct tctggccaag aaaaaggctg aggaagaagc tgaggctaag cccaagttcc 541 tctctaaagc agaacgagag gctgaagctc taaagcgacg gcagcaggag gtggaagagc 601 ggcagaggat gcttgaagaa gagaggaaga aaaggaaaca gttccaagac ttgggcagga 661 agatgttgga agatcctcag gaacgggaac gtcgggaacg cagggagagg atggaacggg 721 agaccaatgg aaatgaggat gaggaagggc ggcagaagat ccgggaagag aaggataaga 781 gcaaggaact gcatgccatt aaggagcgtt acctgggtgg catcaaaaag cggcgccgaa 841 cgagacatct caatgaccgg aaatttgttt ttgagtggga tgcatctgag gacacatcca 901 ttgactacaa ccccctgtac aaagaacggc accaggtgca gttgttaggg cgaggcttca 961 ttgcaggcat tgacctcaag cagcagaagc gagagcagtc acgtttctat ggagacctaa 1021 tggagaagag gcgaaccctg gaagaaaagg agcaggagga ggcaagactc cgcaaacttc 1081 gtaagaagga agccaagcag cgctgggatg atcgtcattg gtctcagaaa aagttagatg 1141 agatgacgga cagggactgg cggatcttcc gtgaggacta cagcatcacc accaaaggtg 1201 gcaagatccc caatcccatc cgatcctgga aagactcttc tctgccccca cacatcttgg 1261 aggtcattga taagtgtggc tacaaggaac caacacctat acagcgtcag gcaattccca 1321 ttgggctaca gaatcgtgac atcattggtg tggctgagac tggcagtggc aagacagcag 1381 ccttcctcat ccctctgctg gtctggatca ccacacttcc caaaattgac aggatcgaag 1441 agtcagacca aggcccttat gccatcatcc tggctcccac ccgtgagttg gctcaacaga 1501 ttgaggaaga gaccatcaag tttgggaaac cgctaggtat ccgcactgtg gctgtcattg 1561 gtggcatctc cagagaagac cagggcttca ggctgcgcat gggttgtgag attgtgattg 1621 ctacccctgg gcgtttgatt gatgtgctgg agaaccgcta cctggtgctg agccgctgta 1681 cctatgtggt tctggatgag gcagatagga tgattgacat gggctttgag ccagatgtcc 1741 agaagatcct ggagcacatg cctgtcagca accagaagcc agacacggat gaggctgagg 1801 accctgagaa gatgctggcc aactttgagt cgggaaaaca taagtaccgc caaacagtca 1861 tgttcacggc caccatgccc ccagcggtgg agcgtctggc caggagctat cttcggcgac 1921 ctgctgtggt gtacattggc tccgcaggca agccccatga gcgtgtggaa cagaaggtct 1981 tcctcatgtc agagtcagaa aagaggaaaa agctgctggc aatcttggag caaggctttg 2041 acccacccat cattattttt gtcaaccaga agaagggctg cgacgtgttg gccaaatccc 2101 tggagaagat ggggtacaat gcttgcacac tgcacggtgg aaaaggccag gagcagcgag 2161 agtttgcgtt gtccaacctc aaggctgggg ccaaggatat tttggtggct acagatgtgg 2221 ctggtcgtgg tattgacatc caagatgtgt ctatggttgt caactatgat atggccaaaa 2281 atattgaaga ttacatccac cgcattggcc gcacgggacg agcaggcaag agtggggtgg 2341 ccatcacctt cctcacaaaa gaggactctg ctgtgttcta cgagctgaag caagctatcc 2401 tggaaagccc agtgtcttcc tgtccccccg aactagccaa ccacccagat gcccagcata 2461 agccaggcac catcctcacc aagaagcgcc gggaagagac catctttgcc tgacacagca 2521 ctcttcctgt gggctgaggg catctccaaa gctgcctgat gcctgttttt cagaaccctc 2581 acatccctct ttccaggtcc tcactcttgg gatatggggg cttaggaaaa caatccaact 2641 ccctagccca gaccctcagg tcaggaggcc tgcgtgtggg gctgcaaaag gagaggacga 2701 cgctgtcgga ggcagggaga gcaaattacc acagcttctt ggcccagttc tgcccttctt 2761 tgctttggga ttgcactggg ccatcagctc atgccaggct atgggggcag ccagttggca 2821 ttgctcccca gactgaacag aaacctggcc gccggatggg acctcctttg gcacagactt 2881 gactgtgtaa ctgcataaac tgcagtagca tcattgccct agatgcccca ggagacctgg 2941 caccatgagg attacagaca gtggaatctt actgtcatct ggacagctgt tttcctgttt 3001 ggatggtaaa ggaagttgag agtctttaga cctgtgcaca gccccgcacc aaggggtgct 3061 gtatgctcta ggcatcccct cccccagggg attttctaag tagatggggg gacacggtga 3121 actggctgtg tccatctttg tcactgagtg aaatctctgt tttctattct ctgagaagat 3181 aagtttgtat gttctgagaa taaatacatg aatattaaaa aaaaaaaaaa aaaaa //