LOCUS BC002352 2254 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 1, mRNA
(cDNA clone MGC:8425 IMAGE:2821008), complete cds.
ACCESSION BC002352
VERSION BC002352.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2254)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2254)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC002352.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: e Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453689.
FEATURES Location/Qualifiers
source 1..2254
/db_xref="H-InvDB:HIT000030819"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8425 IMAGE:2821008"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2254
/gene="DNAJB1"
/gene_synonym="Hsp40"
/db_xref="GeneID:3337"
/db_xref="HGNC:HGNC:5270"
/db_xref="MIM:604572"
CDS 35..1057
/gene="DNAJB1"
/gene_synonym="Hsp40"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily B, member 1"
/protein_id="AAH02352.1"
/db_xref="GeneID:3337"
/db_xref="HGNC:HGNC:5270"
/db_xref="MIM:604572"
/translation="MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEK
FKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMF
AEFFGGRNPFDTFFGQRNGEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQ
DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKI
TFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTL
DGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVL
EQVLPI"
BASE COUNT 556 a 590 c 582 g 526 t
ORIGIN
1 gcgacagcgg gtcggcgggc cgcaagaggg ggtcatgggt aaagactact accagacgtt
61 gggcctggcc cgcggcgcgt cggacgagga gatcaagcgg gcctaccgcc gccaggcgct
121 gcgctaccac ccggacaaga acaaggagcc cggcgccgag gagaagttca aggagatcgc
181 tgaggcctac gacgtgctca gcgacccgcg caagcgcgag atcttcgacc gctacgggga
241 ggaaggccta aaggggagtg gccccagtgg cggtagcggc ggtggtgcca atggtacctc
301 tttcagctac acattccatg gagaccctca tgccatgttt gctgagttct tcggtggcag
361 aaatcccttt gacacctttt ttgggcagcg gaacggggag gaaggcatgg acattgatga
421 cccattctct ggcttcccta tgggcatggg tggcttcacc aacgtgaact ttggccgctc
481 ccgctctgcc caagagcccg cccgaaagaa gcaagatccc ccagtcaccc acgaccttcg
541 agtctccctt gaagagatct acagcggctg taccaagaag atgaaaatct cccacaagcg
601 gctaaacccc gacggaaaga gcattcgaaa cgaagacaaa atattgacca tcgaagtgaa
661 gaaggggtgg aaagaaggaa ccaaaatcac tttccccaag gaaggagacc agacctccaa
721 caacattcca gctgatatcg tctttgtttt aaaggacaag ccccacaata tctttaagag
781 agatggctct gatgtcattt atcctgccag gatcagcctc cgggaggctc tgtgtggctg
841 cacagtgaac gtccccactc tggacggcag gacgataccc gtcgtattca aagatgttat
901 caggcctggc atgcggcgaa aagttcctgg agaaggcctc cccctcccca aaacacccga
961 gaaacgtggg gacctcatta ttgagtttga agtgatcttc cccgaaagga ttccccagac
1021 atcaagaacc gtacttgagc aggttcttcc aatatagcta tctgagctcc ccaaggactg
1081 accagggacc tttccagagc tcaaggattt ctggaccttt ctaccagttg tggaccatga
1141 gagggtggga gggcccaggg agggctttcg tactgctgaa tgttttccag agcatatatt
1201 acaatctttc aaagtcgcac actagacttc agtggttttt cgagctatag ggcatcaggt
1261 ggtgggaaca gcaggaaaag gcattccagt ctgccccact gggtctggca gccctcccgg
1321 gatgggccca catccacctc cagtccctgg ccaggggtga gaggcagacc agcagctgga
1381 cttgatccct ctgtgtcttt ttgcttctgg ctggtagata atgtcaacct gcagtcttga
1441 ttcccagacc ctgtacactc ctccttttct gttgtgtgat cagtttgtgc tttattctgt
1501 atttgtctcc catgtcttgc tcttctcctg gagaattctg tcttctcttt ggccatctca
1561 aattgagaac ctaaactatt cctgcagaac tgcctggttg gcgtccacaa gcaatacctc
1621 tcgttccagc aggaccaagg gagccagcct ccagtgagtg actccagcaa gtgcagccac
1681 ctctcccttg atggtctggg agcctggcct cagcaagggg ccttcctgac ctctggctcc
1741 agtgaagctg aatgtcctca ctttgtgggt cacactcttt acatttctgt aaggcaatct
1801 tggcacacgt ggggcttacc agtggcccag gtaatttttt gtttcatgga ctatggactc
1861 tttcaaaggg atctgatcct tttgaatttt gcacagccct agatacaatc ccttttgata
1921 aaagggtctt tgcttctgat tacaggagca ctgtggaacg tctgtaaata tgtttttata
1981 attccatgta tagttggtgt acactcaaaa cctgtccctg gcagccagtg ctctctgtat
2041 agggccataa tggaattctg aagaaatctt ggggagggaa ggggagttgg aacaaatgtc
2101 tgttccctgg aggccagtcc agtgctcaga cctttagact cattgtaagt tgccactgcc
2161 aacatgagac caaagtgtgt gactagtcaa tgaagtgcga cagcattaaa gactgatgct
2221 aaacctcaaa aaacaaaaaa aaaaaaaaaa aaaa
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