LOCUS BC002331 1183 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens chromosome 11 open reading frame 79, mRNA (cDNA clone
MGC:4724 IMAGE:3535474), complete cds.
ACCESSION BC002331
VERSION BC002331.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1183)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1183)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC002331.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: k Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923449.
FEATURES Location/Qualifiers
source 1..1183
/db_xref="H-InvDB:HIT000030804"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4724 IMAGE:3535474"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1183
/gene="C11orf79"
/gene_synonym="FLJ20487"
/db_xref="GeneID:54949"
/db_xref="HGNC:HGNC:26034"
CDS 6..506
/gene="C11orf79"
/gene_synonym="FLJ20487"
/codon_start=1
/product="chromosome 11 open reading frame 79"
/protein_id="AAH02331.1"
/db_xref="GeneID:54949"
/db_xref="HGNC:HGNC:26034"
/translation="MAVSTVFSTSSLMLALSRHSLLSPLLSVTSFRRFYRGDSPTDSQ
KDMIEIPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQL
NLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDLEY
LFEKPR"
BASE COUNT 324 a 297 c 282 g 280 t
ORIGIN
1 ggaaaatggc ggtgtctaca gtgttctcga cttcgtcgct gatgcttgct ctgtcaaggc
61 acagcctatt gtctcctttg ctcagtgtga catcattcag acgcttctac agaggtgaca
121 gcccaacaga ttcccaaaag gacatgattg aaatcccttt gcctccatgg caggagagaa
181 ctgatgaatc catagaaacc aaaagagccc gcctgctcta tgagagcaga aagaggggaa
241 tgttggaaaa ctgcattctt cttagtcttt ttgctaaaga acatctgcag cacatgacag
301 aaaagcagct gaacctctat gaccgcctga ttaacgagcc tagtaatgac tgggatattt
361 actactgggc cacagaagct aaaccagccc cagaaatatt tgaaaatgaa gtcatggccc
421 tgctgagaga ctttgctaaa aacaaaaaca aagagcagag actgcgtgcc ccagatcttg
481 agtacctctt tgaaaagcca cgttgagctg tgctccacgg cctggcatgg gggttcagtc
541 tgtggatggt aactacttat gatggacgtt agccttgctt ccggcttctt agatgcccag
601 ctgccctacc ccagaccact ggtcctgcct caagtgatgg acataaccct ctcctaggac
661 atacatgtaa atgcacaatg tgactcattc tcatactttt ttgttcagct ctgagcctca
721 aaagtgattt gtcagcagcg ctggcatgca ggctttgcct ggctgctatc tctagaggca
781 agtctgccac gagagggcac tgcaggcgaa gcagttgtgc ttgctcattg cctcagccca
841 agtgtactca aagaaaagag gcagccagct gtgcgtgctg tacggaaagc ctcccgccct
901 ccctgcagct ccccgccctc agtggcccag ggctttgttg aagtggaact ccccacttcc
961 aacctggtat ggctccttct gcgaagggaa gctgatccca gcctcctgag ctgaatcctt
1021 caaaggcaca gcaggcagaa tgagggccac aggcaggagt ggtgtgggca cactgcttag
1081 gagtcaacat cttcatcatt gggctttctt taaaacgtgc actttgtaat ttgaaagaga
1141 attattaaag catactgaaa aaaggaaaaa aaaaaaaaaa aaa
//