LOCUS BC001956 1740 bp mRNA linear HUM 12-OCT-2006
DEFINITION Homo sapiens folliculin interacting protein 1, mRNA (cDNA clone
IMAGE:3536789), complete cds.
ACCESSION BC001956
VERSION BC001956.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1740)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1740)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: n Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57164965
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1740
/db_xref="H-InvDB:HIT000030782"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3536789"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1740
/gene="FNIP1"
/gene_synonym="KIAA1961"
/gene_synonym="MGC667"
/db_xref="GeneID:96459"
/db_xref="HGNC:HGNC:29418"
CDS 96..1622
/gene="FNIP1"
/gene_synonym="KIAA1961"
/gene_synonym="MGC667"
/codon_start=1
/product="FNIP1 protein"
/protein_id="AAH01956.1"
/db_xref="GeneID:96459"
/db_xref="HGNC:HGNC:29418"
/translation="MAPTLFQKLFSKRTGLGAPGRDARDPDCGFSWPLPEFDPSQIRL
IVYQDCERRGRNVLFDSSVKRRNEDISVSKLCSDAQVKVFGKCCQLKPGGDSSSSLDS
SVTSSSDIKDQCLKYQGSRCSSDANMLGEMMFGSVAMSYKGSTLKIHQIRSPPQLMLS
KVFTARTGSSICGSLNTLQDSLEFINQDNNTLKADNNTVINGLLGNIGLSQFCSPRRA
FSEQGPLRLIRSASFFAVHSNPMDMPGRELNEDRDSGIARSASLSSLLITPFPSPNSS
LTRSCASSYQRRWRRSQTTSLENGVFPRWSIEESFNLSDESCGPNPGIVRKKKIAIGV
IFSLSKDEDENNKFNEFFFSHFPLFESHMNKLKSAIEQAMKMSRRSADASQRSLAYNR
IVDALNEFRTTICNLYTMPRIGEPVWLTMMSGTPEKNHLCYRFMKEFTFLMENASKNQ
FLPALITAVLTNHLAWVPTVMPNGQPPIKIFLEKHSSQSVDMLAKTHPYNPLWAQLGM
"
BASE COUNT 514 a 387 c 388 g 451 t
ORIGIN
1 tatgactgag gcgcccatgg gggtggcggg gcggctgtag gagcaggggc ctagcaagcg
61 cccagcggag cgacccctgc ctggccgtgg ctagcatggc ccctacgctg ttccagaagc
121 tcttcagcaa gaggaccggg ctgggcgcgc ccggccgcga cgcccgggac ccagattgcg
181 ggttcagttg gcctttacca gagtttgatc caagccagat tcgactgatt gtatatcaag
241 actgtgaaag acgagggaga aatgttttgt ttgactccag tgttaagaga agaaatgagg
301 acatatcagt atcgaaactc tgcagtgatg ctcaagttaa agtctttggg aaatgctgcc
361 aactgaaacc tggaggagac agttcttcct ctttagatag ttctgtgact tcatcttctg
421 atataaaaga ccagtgtctt aagtaccagg gttctcggtg ctcttctgat gccaatatgc
481 ttggagagat gatgtttggc tcagtagcaa tgagctacaa aggatccacc ttaaaaattc
541 atcagattcg ttcccctcca cagctcatgc tcagcaaagt gtttactgct cggactggca
601 gcagtatttg tgggagtctc aatacgctac aagatagtct tgaattcatc aatcaggaca
661 acaatacatt aaaggctgat aataacacag ttattaatgg actgcttgga aatataggtc
721 tttcacagtt ctgcagcccc aggcgggcat tctctgagca gggtccgctc cgcctgatca
781 ggagcgcctc tttctttgca gttcacagca acccaatgga catgcctgga agagagctca
841 atgaggacag agacagtggc atagcacggt ctgcatctct cagcagcttg ctgatcactc
901 catttccttc cccaaactcc tcacttaccc gaagttgtgc cagcagctac cagcgacgtt
961 ggcgacgcag ccaaacaaca agtttggaaa atggggtatt tcctagatgg tctatagaag
1021 aaagctttaa tctctcagat gaaagctgtg gccctaaccc aggaattgtg cggaaaaaga
1081 agattgcaat tggggtaatc ttttcattgt ccaaagatga agatgaaaat aacaaattta
1141 atgaattctt tttttcacat tttcctctct ttgaaagcca catgaacaaa ttaaagagtg
1201 caatagaaca ggctatgaaa atgagccgga gatcagctga tgccagtcag agaagtttgg
1261 catataatcg aatagttgat gccctaaatg aattcagaac aacaatttgt aatctttaca
1321 cgatgccacg aattggagaa cctgtctggc ttacaatgat gtcggggact ccagaaaaga
1381 accacctttg ctatcgtttc atgaaggagt tcacctttct aatggaaaat gcttccaaaa
1441 atcaattctt gccagctctc attactgcag ttctgaccaa tcatcttgcc tgggttccaa
1501 cagtcatgcc aaatggacaa ccacctataa aaatattttt agaaaagcat tcctctcaga
1561 gtgtggacat gttggcaaag actcatccat ataacccact ttgggcacaa ctgggtatgt
1621 aatctgacaa ctgttacact atgtattaga cttttttgta gctatctgta attattttat
1681 agcaaaacca aaaataaata aaatgctttt acctcctgca aaaaaaaaaa aaaaaaaaaa
//