LOCUS BC001954 2345 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae), mRNA (cDNA clone MGC:4388 IMAGE:2905308), complete cds. ACCESSION BC001954 VERSION BC001954.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2345) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2345) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: k Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4758555. FEATURES Location/Qualifiers source 1..2345 /db_xref="H-InvDB:HIT000030780" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4388 IMAGE:2905308" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2345 /gene="PRPF3" /gene_synonym="HPRP3" /gene_synonym="HPRP3P" /gene_synonym="PRP3" /gene_synonym="Prp3p" /db_xref="GeneID:9129" /db_xref="HGNC:HGNC:17348" /db_xref="MIM:607301" CDS 58..2109 /gene="PRPF3" /gene_synonym="HPRP3" /gene_synonym="HPRP3P" /gene_synonym="PRP3" /gene_synonym="Prp3p" /codon_start=1 /product="PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae)" /protein_id="AAH01954.1" /db_xref="GeneID:9129" /db_xref="HGNC:HGNC:17348" /db_xref="MIM:607301" /translation="MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDK KKAADHLKPFLDDSTLRFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEIS KESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQL SFISPPTPQPKTPSSSQPERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLA LKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTH RMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGK FEKIAQRLRTKAQLEKLQAEISQAARKTGIHTSTRLALIAPKKELKEGDIPEIEWWDS YIIPNGFDLTEENPKREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRR QTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQ KAHEEANAARKLTAEQRKVKKIKKLKEDISQGVHISVYRVRNLSNPAKKFKIEANAGQ LYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAV KKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSESVLEST D" BASE COUNT 740 a 527 c 579 g 499 t ORIGIN 1 gtttgtgagg tgtagtattg agtcctgttt gagctattgt tctctttttc ctgaaaaatg 61 gcactgtcaa agagggagct ggatgagctg aaaccatgga tagagaagac agtgaagagg 121 gtcctgggtt tctcagagcc tacggtggtc acagcagcat tgaactgtgt ggggaagggc 181 atggacaaga agaaggcagc cgatcatctg aaaccttttc ttgatgattc tactctccga 241 tttgtggaca aactgtttga ggctgtggag gaaggccgaa gctctaggca ttccaagtct 301 agcagtgaca ggagcagaaa acgagagcta aaggaggtgt ttggtgatga ctctgagatc 361 tctaaagaat catcaggagt aaagaagcga cgaatacccc gttttgagga ggtggaagaa 421 gagccagagg tgatccctgg gcctccatca gagagccctg gcatgctgac taagctccag 481 atcaaacaga tgatggaggc agcaacacga caaatcgagg agaggaaaaa acagctgagc 541 ttcattagcc cccctacacc tcagccaaag actccttctt cctcccaacc agaacgactt 601 cctattggca acactattca gccctcccag gctgccactt tcatgaatga tgccattgag 661 aaggcaagga aagcagctga actgcaagct cgaatccaag cccagctggc actgaagcca 721 ggactcatcg gcaatgccaa catggtgggc ctggctaatc tccatgccat gggcattgct 781 cccccgaagg tggagttaaa agaccaaacg aaacctacac cactgatcct ggatgagcaa 841 gggcgcactg tagatgcaac aggcaaggag attgagctga cacaccgcat gcctactctg 901 aaagccaata ttcgtgctgt gaagagggaa caattcaagc aacaactaaa ggaaaagcca 961 tcagaagaca tggaatccaa tacctttttt gacccccgag tctccattgc cccttcccag 1021 cgccagagac gcacttttaa attccatgac aagggcaaat ttgagaagat tgctcagcga 1081 ttacggacaa aggctcaact ggagaagcta caggcagaga tttcacaagc agctcgaaaa 1141 acaggcatcc atacttcgac taggcttgcc ctcattgctc ctaagaagga gctaaaggaa 1201 ggagatattc ctgaaattga gtggtgggac tcttacataa tccccaatgg ctttgatctt 1261 acagaggaaa atcccaagag agaagattat tttggaatca caaatcttgt tgaacatcca 1321 gcccagctca atcctccagt tgacaatgac acaccagtta ctctgggagt atatcttacc 1381 aagaaggaac agaaaaaact tcggagacaa acaaggaggg aagcacagaa ggaactacaa 1441 gaaaaagtca ggctgggcct gatgcctcct ccagaaccca aagtgagaat ttctaatttg 1501 atgcgagtat taggaacaga agctgttcaa gaccccacga aggtagaagc ccacgtcaga 1561 gctcagatgg caaaaagaca gaaagcgcat gaagaggcca acgctgcccg aaaactcaca 1621 gcagaacaga gaaaggtcaa gaaaattaaa aagcttaaag aagacatttc acagggggta 1681 cacatatctg tatatagagt tcgaaatttg agcaacccag ccaagaagtt caagattgaa 1741 gccaatgctg ggcaactgta cctgacaggg gtggtggtac tgcacaagga tgtcaacgtg 1801 gtagtagtgg aagggggccc caaggcccag aagaaattta agcgtcttat gctgcatcgg 1861 ataaagtggg atgaacagac atctaacaca aagggagatg atgatgagga gtctgatgag 1921 gaagctgtga agaaaaccaa caaatgtgta ctagtctggg agggtacagc caaagaccgg 1981 agctttggag agatgaagtt taaacagtgt cctacagaga acatggctcg tgagcatttc 2041 aaaaagcatg gggctgaaca ctactgggac cttgcgctga gtgaatctgt gttagagtcc 2101 actgattgag actactgcaa gcccttgcct ctcctccctt gcctttgtct cttcagtcct 2161 ctcacttatt ctatttccca accccctccc acttgtttgt gtgatctcag aactgtgcca 2221 agcagacact gggacaaagg gagaatatct tgctcccctc ctgagtcagc ctggtgttgc 2281 cctttattcc ccttatgtgc atatgattaa agagttattt ttaaaaaaaa aaaaaaaaaa 2341 aaaaa //