LOCUS BC001953 1124 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 3-hydroxybutyrate dehydrogenase, type 2, mRNA (cDNA
clone MGC:4385 IMAGE:2905279), complete cds.
ACCESSION BC001953
VERSION BC001953.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1124)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1124)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: c Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66933013.
FEATURES Location/Qualifiers
source 1..1124
/db_xref="H-InvDB:HIT000030779"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4385 IMAGE:2905279"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1124
/gene="BDH2"
/gene_synonym="EFA6R"
/gene_synonym="FLJ13261"
/gene_synonym="PRO20933"
/gene_synonym="UCPA-OR"
/gene_synonym="UNQ6308"
/db_xref="GeneID:56898"
/db_xref="HGNC:HGNC:32389"
CDS 99..836
/gene="BDH2"
/gene_synonym="EFA6R"
/gene_synonym="FLJ13261"
/gene_synonym="PRO20933"
/gene_synonym="UCPA-OR"
/gene_synonym="UNQ6308"
/codon_start=1
/product="3-hydroxybutyrate dehydrogenase, type 2"
/protein_id="AAH01953.1"
/db_xref="GeneID:56898"
/db_xref="HGNC:HGNC:32389"
/translation="MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQ
ELEKYPGIQTRVLDVTKKKQIDQFASEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSM
NLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKS
VAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIA
MLCVYLASDESAYVTGNPVIIDGGWSL"
BASE COUNT 342 a 225 c 251 g 306 t
ORIGIN
1 cttgcttcca gacaaaggtt gtctcaagtt tgttgctcaa accgagttct ggagaacgcc
61 atcagctcgc tgcttaaaat taaaccacag gttccattat gggtcgactt gatgggaaag
121 tcatcatcct gacggccgct gctcagggga ttggccaagc agctgcctta gcttttgcaa
181 gagaaggtgc caaagtcata gccacagaca ttaatgagtc caaacttcag gaactggaaa
241 agtacccggg tattcaaact cgtgtccttg atgtcacaaa gaagaaacaa attgatcagt
301 ttgccagtga agttgagaga cttgatgttc tctttaatgt tgctggtttt gtccatcatg
361 gaactgtcct ggattgtgag gagaaagact gggacttctc gatgaatctc aatgtgcgca
421 gcatgtacct gatgatcaag gcattccttc ctaaaatgct tgctcagaaa tctggcaata
481 ttatcaacat gtcttctgtg gcttccagcg tcaaaggagt tgtgaacaga tgtgtgtaca
541 gcacaaccaa ggcagccgtg attggcctca caaaatctgt ggctgcagat ttcatccagc
601 agggcatcag gtgcaactgt gtgtgcccag gaacagttga tacgccatct ctacaagaaa
661 gaatacaagc cagaggaaat cctgaagagg cacggaatga tttcctgaag agacaaaaga
721 cgggaagatt cgcaactgca gaagaaatag ccatgctctg cgtgtatttg gcttctgatg
781 aatctgctta tgtaactggt aaccctgtca tcattgatgg aggctggagc ttgtgatttt
841 aggatctcca tggtgggaag gaaggcaggc ccttcctatc cacagtgaac ctggttacga
901 agaaaactca ccaatcatct ccttcctgtt aatcacatgt taatgaaaat aagctctttt
961 taatgatgtc actgtttgca agagtctgat tctttaagta tattaatctc tttgtaatct
1021 cttctgaaat cattgtaaag aaataaaaat attgaactca tagcaggaga atagttttta
1081 aaataaatct cgatttgtta gcatcaaaaa aaaaaaaaaa aaaa
//