LOCUS BC001932 1326 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase,
5, mRNA (cDNA clone MGC:3997 IMAGE:2820259), complete cds.
ACCESSION BC001932
VERSION BC001932.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1326)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1326)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24497434.
FEATURES Location/Qualifiers
source 1..1326
/db_xref="H-InvDB:HIT000030759"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3997 IMAGE:2820259"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1326
/gene="PSMC5"
/gene_synonym="p45"
/gene_synonym="p45/SUG"
/gene_synonym="S8"
/gene_synonym="SUG1"
/gene_synonym="TBP10"
/gene_synonym="TRIP1"
/db_xref="GeneID:5705"
/db_xref="HGNC:HGNC:9552"
/db_xref="MIM:601681"
CDS 33..1253
/gene="PSMC5"
/gene_synonym="p45"
/gene_synonym="p45/SUG"
/gene_synonym="S8"
/gene_synonym="SUG1"
/gene_synonym="TBP10"
/gene_synonym="TRIP1"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
ATPase, 5"
/protein_id="AAH01932.1"
/db_xref="GeneID:5705"
/db_xref="HGNC:HGNC:9552"
/db_xref="MIM:601681"
/translation="MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRR
LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKN
IDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE
IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE
LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLEL
LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSR
KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ
KDSEKNMSIKKLWK"
BASE COUNT 378 a 285 c 390 g 273 t
ORIGIN
1 cggatgccgg cggtctctgc tgaagagaga agatggcgct tgacggacca gagcagatgg
61 agctggagga ggggaaggca ggcagcggac tccgccaata ttatctgtcc aagattgaag
121 aactccagct gattgtgaat gataagagcc aaaacctccg gaggctgcag gcacagagga
181 acgaactaaa tgctaaagtt cgcctattgc gggaggagct acagctgctg caggagcagg
241 gctcctatgt gggggaagta gtccgggcca tggataagaa gaaagtgttg gtcaaggtac
301 atcctgaagg taaatttgtt gtagacgtgg acaaaaacat tgacatcaat gatgtgacac
361 ccaattgccg ggtggctcta aggaatgaca gctacactct gcacaagatc ctgcccaaca
421 aggtagaccc attagtgtca ctgatgatgg tggagaaagt accagattca acttatgaga
481 tgattggtgg actggacaaa cagatcaagg agatcaaaga agtgatcgag ctgcctgtta
541 agcatcctga gctcttcgaa gcactgggca ttgctcagcc caagggagtg ctgctgtatg
601 gacctccagg cactgggaag acactgttgg cccgggctgt ggctcatcat acggactgta
661 cctttattcg tgtctctggc tctgaactgg tacagaaatt cataggggaa ggggcaagaa
721 tggtgaggga gctgtttgtc atggcacggg aacatgctcc atctatcatc ttcatggacg
781 aaatcgactc catcggctcc tcgcggctgg aggggggttc tggaggggac agtgaagtgc
841 agcgcacgat gctggagttg ctcaaccagc tcgacggctt tgaggccacc aagaacatca
901 aggttatcat ggctactaat aggattgata tcctggactc ggcactgctt cgcccagggc
961 gcattgacag aaaaattgaa ttcccacccc ccaatgagga ggcccggctg gacattttga
1021 agattcattc tcggaagatg aacctgaccc gggggatcaa cctgagaaaa attgctgagc
1081 tcatgccagg agcatcaggg gctgaagtga agggcgtgtg cacagaagct ggcatgtatg
1141 ccctgcgaga acggcgagtc catgtcactc aggaggactt tgagatggca gtagccaagg
1201 tcatgcagaa ggacagtgag aaaaacatgt ccatcaagaa attatggaag tgagtggaca
1261 gcctttgtgt gtatctctcc aataaagctc tgtgggccaa gtcaaaaaaa aaaaaaaaaa
1321 aaaaaa
//