LOCUS BC001927 2202 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens TBC1 domain family, member 22B, mRNA (cDNA clone
IMAGE:2819303), partial cds.
ACCESSION BC001927
VERSION BC001927.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2202)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2202)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9257241.
FEATURES Location/Qualifiers
source 1..2202
/db_xref="H-InvDB:HIT000086113"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2819303"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2202
/gene="TBC1D22B"
/gene_synonym="C6orf197"
/gene_synonym="dJ744I24.2"
/gene_synonym="FLJ20337"
/db_xref="GeneID:55633"
CDS <1..386
/gene="TBC1D22B"
/gene_synonym="C6orf197"
/gene_synonym="dJ744I24.2"
/gene_synonym="FLJ20337"
/codon_start=3
/product="TBC1D22B protein"
/protein_id="AAH01927.1"
/db_xref="GeneID:55633"
/translation="ALEELVSRIDEQVHNHFRRYEVEYLQFAFRWMNNLLMRELPLRC
TIRLWDTYQSEPEGFSHFHLYVCAAFLIKWRKEILDEEDFQGLLMLLQNLPTIHWGNE
EIGLLLAEAYRLKYMFADAPNHYRR"
BASE COUNT 503 a 551 c 548 g 600 t
ORIGIN
1 aggcactgga agagcttgtc agccggattg atgagcaggt acataatcac ttcaggaggt
61 acgaggtaga atacctgcag tttgccttcc gctggatgaa caacctgctt atgcgggagc
121 ttcctcttcg ctgcaccatc cgcctgtggg acacatatca gtctgaacca gaagggttct
181 cccactttca tctctacgtg tgtgcagcct tcttgatcaa gtggaggaaa gagatcttgg
241 atgaggagga ttttcagggt ctcctcatgc tgctacagaa cctacctaca atacactggg
301 gcaacgaaga aattgggctg cttctcgccg aggcatacag actcaagtac atgtttgccg
361 atgccccaaa tcactaccgc cgataggtgc tgtctcctcc ggggacccag actgccttca
421 tctctgatgg cagtctgatc actgtggcca ctgtgcgagc cgtggacccc ggccaggaac
481 cactcctgtt gtacaaagct cacacccacc gcccaggtct taactttctg gcatccacca
541 ctccatgtct ctggatgtgt cacttggacc actgtcagta ttccatgccg cgtggatggg
601 cccagttctg ggagaggaca gaaaaggtgg tacagggttg tctgcccctt taaaagaaac
661 tggacaaaga aggggaaggc tcagggtctc acctcacatt gtccctacaa ggacaggccc
721 caactgataa ccgttgcttt tttttttttg tgaacatagt ttgatttgat cacaggtcaa
781 aaacgcctta tattttcgaa agactcctgg cccctcttcc ctcttcctgg tttcctagcc
841 gttccccttc tgccccagtc tgagccagtg aggggtagct ttttaaaacc attattctag
901 atggaggagg cactgatgct tgtaactctg gaaagaggcc tacacccaag ggctaggaat
961 tttatttttc cttttctcac caggtgtctg catgtgtgtg tgggtgtgaa tgtgtataca
1021 tgcccatcag catttagtca catgtctgaa tttctgtgtc cagacgagcc ccatcaaact
1081 agttgggaag ggccccagtg accaagtgta taagcatccc ttgaagaggg attggggcag
1141 gggaggcaga aggggctctc cagacccctt ttccatgatg acccactcca agatattatg
1201 tgtaaattgt gttattatgt atatgggtaa agatgtacaa atatatgtcc tctttgtagc
1261 agatatgatt ttatatttat aatgtgcatc aacatgtgaa agcaatctag gtcactagca
1321 cagaggaagt tgccaggaag gtggcttcag cacctccagg ttggttctgg gtgtcctgct
1381 gtgaggggta gaacgggagg ctgctgaagt gagtagctga gcagctggag ccatcccaag
1441 catcagtgtc tcagagtcct cctcgcccct ttcttcaccc cgccccccaa cccccagact
1501 ttcctggagc atctgccctt tgctcctagc agcctcccca ggaagggact gcagaggcgg
1561 gcaagccctc tctatgtgtt tttatctcca ccttccccgg aatctgggga gggcttttgt
1621 ttttacgttt tcaagttcag cattgtattc ggacagaagc tgtgactgaa gactcagtgc
1681 caaggaaagg ggcttcttgt gtgtccctcg ggtttggggc tcttctcaga gagcagcact
1741 ccatatccct tactgtcacc ttcactcccc acacagctca tgagatgtgt gacccctgtt
1801 tgagttttgg tatttggtag tggagggtgg ggggatgggg gccagcagct gtcatcctcc
1861 tgggaagccg agcagtgtcc ctggtgggta acaccctcaa gtctctttgc cagtgaggcc
1921 ccaccacatc ggtgtgagtt aggtttctca tctggagctg tttctcaggc attcttccca
1981 accctcttcc ttttcccctt cggtgtgcct cagtggtctc cttcatagag tgagagggct
2041 tgagaccctc cctcaaccgg actaattaaa gaaagacact tgtgttccca agtggtggtt
2101 ttattttttt agtttttatg tttgtatggg aaattgtgga taaagtgaaa agaattgtaa
2161 ataaatggtg tatttcctcc tccaaaaaaa aaaaaaaaaa aa
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