LOCUS BC001925 1523 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens FK506 binding protein 1A, 12kDa, mRNA (cDNA clone
MGC:3950 IMAGE:2823635), complete cds.
ACCESSION BC001925
VERSION BC001925.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1523)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1523)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: m Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17149837.
FEATURES Location/Qualifiers
source 1..1523
/db_xref="H-InvDB:HIT000030753"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3950 IMAGE:2823635"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1523
/gene="FKBP1A"
/gene_synonym="FKBP-12"
/gene_synonym="FKBP12"
/gene_synonym="FKBP12C"
/gene_synonym="PKC12"
/gene_synonym="PKCI2"
/gene_synonym="PPIASE"
/db_xref="GeneID:2280"
/db_xref="HGNC:HGNC:3711"
/db_xref="MIM:186945"
CDS 49..375
/gene="FKBP1A"
/gene_synonym="FKBP-12"
/gene_synonym="FKBP12"
/gene_synonym="FKBP12C"
/gene_synonym="PKC12"
/gene_synonym="PKCI2"
/gene_synonym="PPIASE"
/codon_start=1
/product="FK506 binding protein 1A, 12kDa"
/protein_id="AAH01925.3"
/db_xref="GeneID:2280"
/db_xref="HGNC:HGNC:3711"
/db_xref="MIM:186945"
/translation="MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRN
KPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDV
ELLKLE"
BASE COUNT 354 a 379 c 327 g 463 t
ORIGIN
1 tccacgccgc ccgtcgcgcc gcccgcccgc tcagcgtccg ccgccgccat gggagtgcag
61 gtggaaacca tctccccagg agacgggcgc accttcccca agcgcggcca gacctgcgtg
121 gtgcactaca ccgggatgct tgaagatgga aagaaatttg attcctcccg ggacagaaac
181 aagcccttta agtttatgct aggcaagcag gaggtgatcc gaggctggga agaaggggtt
241 gcccagatga gtgtgggtca gagagccaaa ctgactatat ctccagatta tgcctatggt
301 gccactgggc acccaggcat catcccacca catgccactc tcgtcttcga tgtggagctt
361 ctaaaactgg aatgacagga atggcctcct cccttagctc cctgttcttg gatctgccgt
421 ggagggatct ggtgcctcca gacatgtgca catgaatcca tatggagctt ttcctgatgt
481 tccactccac tttgtataga catctgccct gactgaatgt gttctgtcac tcagctttgc
541 ttccgacacc tctgtttcct cttccccttt ctcctcgtat gtgtgtttac ctaaactata
601 tgccataaac ctcaagttac tcattttatt ttgttttcat tttggggtga agattcagtt
661 tcagtctttt ggatataggt ttccaattaa gtacatggtc aagtattaac agcacaagtg
721 gtaggttaac attagaatag gaattggtgt tggggggggg tttgcaagaa tattttattt
781 taattttttg gatgaaattt ttatctatta tatattaaac attcttgctg ctgcgctgca
841 aagccatagc agatttgagg cgctgttgag gactgaatta ctctccaagt tgagagatgt
901 ctttgggtta aattaaaagc cctacctaaa actgaggtgg ggatggggag agcctttgcc
961 tccaccattc ccacccaccc tccccttaaa ccctctgcct ttgaaagtag atcatgttca
1021 ctgcaatgct ggacactaca ggtatctgtc cctgggccag cagggacctc tgaagccttc
1081 tttgtggcct tttttttttt ttcatcctgt ggtttttcta atggactttc aggaattttg
1141 taatctcata actttccaag ctccaccact tcctaaatct taagaacttt aattgacagt
1201 ttcaattgaa ggtgctgttt gtagacttaa cacccagtga aagcccagcc atcatgacaa
1261 atccttgaat gttctcttaa gaaaatgatg ctggtcatcg cagcttcagc atctcctgtt
1321 ttttgatgct tggctccctc tgctgatctc agtttcctgg cttttcctcc ctcagcccct
1381 tctcacccct ttgctgtcct gtgtagtgat ttggtgagaa atcgttgctg cacccttccc
1441 ccagcaccat ttatgagtct caagttttat tattgcaata aaagtgcttt atgccggctt
1501 ttctcaaaaa aaaaaaaaaa aaa
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