LOCUS BC001900 1569 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens branched chain aminotransferase 2, mitochondrial, mRNA
(cDNA clone MGC:2082 IMAGE:3537603), complete cds.
ACCESSION BC001900
VERSION BC001900.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1569)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1569)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: p Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50658083.
FEATURES Location/Qualifiers
source 1..1569
/db_xref="H-InvDB:HIT000030731"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2082 IMAGE:3537603"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1569
/gene="BCAT2"
/gene_synonym="BCAM"
/db_xref="GeneID:587"
/db_xref="HGNC:HGNC:977"
/db_xref="MIM:113530"
CDS 14..1192
/gene="BCAT2"
/gene_synonym="BCAM"
/codon_start=1
/product="branched chain aminotransferase 2,
mitochondrial"
/protein_id="AAH01900.1"
/db_xref="GeneID:587"
/db_xref="HGNC:HGNC:977"
/db_xref="MIM:113530"
/translation="MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQK
PHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLF
EGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVP
DAAGTSLYVRPVLIGNEPSLGVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFI
RAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTH
EDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVRE
VFGSGTACQVCPVHRILYKDRNLHIPTMENGPELILRFQKELKEIQYGIRAHEWMFPV
"
BASE COUNT 314 a 487 c 452 g 316 t
ORIGIN
1 cgccgcacgg atcatggccg cagccgctct ggggcagatc tgggcacgaa agcttctctc
61 tgtcccttgg cttctgtgtg gtcccagaag atatgcctcc tccagtttca aggctgcaga
121 cctgcagctg gaaatgacac agaagcctca taagaagcct ggccccggcg agcccctggt
181 gtttgggaag acatttaccg accacatgct gatggtggaa tggaatgaca agggctgggg
241 ccagccccga atccagccct tccagaacct cacgctgcac ccagcctcct ccagcctcca
301 ctactccctg cagctgtttg agggcatgaa ggcgttcaaa ggcaaagacc agcaggtgcg
361 cctcttccgc ccctggctca acatggaccg gatgctgcgc tcagccatgc gcctgtgcct
421 gccgagtttc gacaagctgg agttgctgga gtgcatccgc cggctcatcg aagtggacaa
481 ggactgggtc cccgatgccg ccggcaccag cctctatgtg cggcctgtgc tcattgggaa
541 cgagccctcg ctgggtgtca gccagcccac gcgcgcgctc ctgttcgtca ttctctgccc
601 agtgggtgcc tacttccctg gaggctccgt gaccccggtc tccctcctgg ccgacccagc
661 cttcatccgg gcctgggtgg gcggggtcgg caactacaag ttaggtggga attatgggcc
721 caccgtgtta gtgcaacagg aggcactcaa gcggggctgt gaacaggtcc tctggctgta
781 tgggcccgac caccagctca ccgaggtggg aaccatgaac atctttgtct actggaccca
841 cgaagatggg gtgctggagc tggtgacgcc cccgctgaat ggtgttatcc tgcctggagt
901 ggtcagacag agtctactgg acatggctca gacctggggt gagttccggg tggtggagcg
961 cacgatcacc atgaagcagt tgctgcgggc cctggaggag ggccgcgtgc gggaagtctt
1021 tggctcgggc accgcttgcc aggtctgccc agtgcaccga atcctgtaca aagacaggaa
1081 cctccacatt cccaccatgg aaaatgggcc tgagctgatc ctccgcttcc agaaggagct
1141 gaaggagatc cagtacggaa tcagagccca cgagtggatg ttcccggtgt gaagctgcag
1201 gctgtgctcc agatccaccg acccgtagca tctcgtcacg ccagcactcg cctccctacc
1261 aatgactcac ctgaagtgca atacgaaata aaaggccagc gggcggcgtc tgggtctctg
1321 gcgcccccat gtggttgcga cactcccaaa gccgtaaggg ccgacccagg catcttggcc
1381 cccagcccct cgtcgcgggt tcaggtccgc ccattactcc ttgtcgtgcg gtcaaggata
1441 caccttggcc ccgattccgg atctctccgt tctcaggcca gacccctggt gctgccgttg
1501 attttttttt ctctgtcttt gctgcaattt tgaaataaaa tgccaaagaa caaaaaaaaa
1561 aaaaaaaaa
//