LOCUS BC001871 915 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens chromosome 20 open reading frame 24, mRNA (cDNA clone
MGC:1222 IMAGE:3546888), complete cds.
ACCESSION BC001871
VERSION BC001871.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 915)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 915)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: l Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10047115.
FEATURES Location/Qualifiers
source 1..915
/db_xref="H-InvDB:HIT000030710"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1222 IMAGE:3546888"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..915
/gene="C20orf24"
/gene_synonym="dJ977B1.3"
/gene_synonym="RIP5"
/db_xref="GeneID:55969"
CDS 136..549
/gene="C20orf24"
/gene_synonym="dJ977B1.3"
/gene_synonym="RIP5"
/codon_start=1
/product="C20orf24 protein"
/protein_id="AAH01871.1"
/db_xref="GeneID:55969"
/translation="MSGGRRKEEPPQPQLANGALKVSVWSKVLRSDAAWEDKDEFLDV
IYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEYGGTWE
LTKEGFMTSFALFMVCVADSFTTGHLDHLLHCHPL"
BASE COUNT 212 a 232 c 245 g 226 t
ORIGIN
1 aggaaccgca gcgcgccgca ggaccgggcc gctgagcctg cagccgcccc gcgccgtgac
61 ctgcgaccct agaccccgac tccctttggc tcagcccgcg cgccccaggc ccggcccggg
121 cggcgcgacg ggaggatgag cggcgggcgg cggaaggagg agccgcctca gccgcagctg
181 gccaacgggg ccctcaaagt ctccgtctgg agtaaggtgc tgcggagcga cgcggcctgg
241 gaggataagg atgaattttt agatgtgatc tactggttcc gacagatcat tgctgtggtc
301 ctgggtgtca tttggggagt tttgccatta cgagggttct tgggaatagc aggattctgc
361 ctgatcaatg caggagtcct gtacctctac ttcagcaatt acctacagat tgatgaggaa
421 gaatatggtg gcacgtggga gctcacgaag gaagggttta tgacctcttt tgccttgttc
481 atggtatgtg tagctgatag ttttacaaca ggtcatttgg atcatctttt acactgccat
541 ccattatgac tgatggtgta cagctcccaa gtgctcccta tccagtccaa aggaccctct
601 tgattacagc acaggaactt gatcgttggg gaaccccagc cccttggaac ttggaagacc
661 cgtgtttcct ggaccgcgaa tcagtgtgtt gggcatcagt gttttctgca agggttgtga
721 cctgaaactt tttaaaaacc acccaccttt ggggaagcat ttctgaattt atccatcacc
781 aaccatttct tcttggatac catcaagtaa cagctattat ttgccaagtg gagctgtcat
841 ttaatttgat gcacctctgg attcagatga aacattaaat tgtcttcctc gattctcaaa
901 aaaaaaaaaa aaaaa
//