LOCUS BC001866 2097 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens replication factor C (activator 1) 5, 36.5kDa, mRNA
(cDNA clone MGC:1155 IMAGE:3544137), complete cds.
ACCESSION BC001866
VERSION BC001866.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2097)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2097)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: l Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31795539.
FEATURES Location/Qualifiers
source 1..2097
/db_xref="H-InvDB:HIT000030706"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1155 IMAGE:3544137"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2097
/gene="RFC5"
/gene_synonym="MGC1155"
/gene_synonym="RFC36"
/db_xref="GeneID:5985"
/db_xref="HGNC:HGNC:9973"
/db_xref="MIM:600407"
CDS 102..1124
/gene="RFC5"
/gene_synonym="MGC1155"
/gene_synonym="RFC36"
/codon_start=1
/product="replication factor C (activator 1) 5, 36.5kDa"
/protein_id="AAH01866.1"
/db_xref="GeneID:5985"
/db_xref="HGNC:HGNC:9973"
/db_xref="MIM:600407"
/translation="METSALKQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTI
QKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIIR
GPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSK
IIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALVTLSSGDMRRALN
ILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLA
LHDILTEIHLFVHRVDFPSSVRIHLLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRD
LIVAEA"
BASE COUNT 610 a 448 c 468 g 571 t
ORIGIN
1 gtaagtgcca gggtctcagg gtcaggtcgc ggctggtcac tgtgcaggcg cttgggtgac
61 gcgacgatct cagcggatct ggtcaccttc gtctccccgc catggagacc tcagcactca
121 agcagcagga gcagcccgcg gcgaccaaga tcaggaacct gccctgggtt gaaaaatacc
181 ggccacagac cctgaatgat ctcatttctc atcaggacat tctgagtacc attcagaagt
241 ttatcaatga agaccgactg ccacacttgc ttctctacgg tcccccaggg acaggcaaga
301 catctaccat cctagcctgt gcgaaacagc tatataaaga caaagaattt ggctccatgg
361 tcttggagct gaatgcttca gatgaccgag gaatagacat cattcgagga ccgatcctga
421 gctttgctag cacaaggaca atatttaaga aaggctttaa gctagtgatc ttggatgaag
481 cagacgccat gactcaggac gcccagaatg ccttgagaag agtaattgag aaattcacag
541 aaaataccag attctgcctc atctgtaact atctgtcaaa gatcatccct gccttgcagt
601 cccgctgcac gaggtttcgg ttcggtcccc tgactcctga actcatggtt ccccgcctgg
661 aacatgtcgt ggaagaagag aaagttgata taagtgaaga tggaatgaaa gcactagtca
721 ctctttccag tggagacatg cgtagggctc tgaacatttt gcagagcacc aatatggcct
781 ttgggaaggt gacagaggag actgtctaca cctgcaccgg gcacccgctc aagtcagaca
841 ttgccaacat cctggactgg atgttgaatc aagatttcac cacagcctac agaaatatta
901 cagagttgaa aactctgaag gggttggcac tgcatgatat cctgacagag atacacttgt
961 ttgtgcatag agttgacttt ccatcttcag ttcgaataca tttattgacc aaaatggcag
1021 acattgagta caggctttct gttggcacca acgagaagat ccagctgagc tccctcattg
1081 ctgcatttca agtcaccaga gacctgattg ttgcagaggc ctagatgctc tgagggccat
1141 tcacaattct cagggctcag cagtgatggg agaacagagg acagttccag gataaactgc
1201 tgcctggggc tgtgggatga atcagtcacc ccgaatcttg gaaaaacccc cttccaggag
1261 aggatgggca ggcatttaaa aagtaccatt tttgtggttg tttggagcag ggatgtacaa
1321 aataatttta atgtattaac tcatactgcc tgtcttttat aggggaaaaa aataaccttt
1381 tttattttaa agttataagg tttttacctt ttagttgctt ggatgacagg gaattagcct
1441 accccatttt ggtctggaac agaagacttt caaatttaat atggtccaag tgtcttccta
1501 ctcaaggtaa acattatctc caaaattaca tttatgattc taatatttgg cattgtgtct
1561 gtatctaatt taaacagatg ttaatggacg tctggccgaa actattatac ttttataaga
1621 tgagctgaat cctcttactt taaaaactgg tctttttatt taccctctgt ggtagaagag
1681 tcaccagcag gttccaaatt gatgtgtatg ataggaaaaa aaccttaatt ttaaatataa
1741 tatagagcct taaactatgc cactgggtgg cagaggctgt ataaaacgca cttgttttca
1801 tgcaggagcg gggcaagtaa ggttgagcct gactgtaaac ctagaactgc ggaaggactg
1861 ggacttttgt acaaatttca catttatttt acagcaatca tgctgcattt gtgttagtgt
1921 tctttataat aaaaaacaaa gcagcctcct ggctggctgt gttacaagtg actcttcctt
1981 agacagctag aaagatgctg actttgtcaa acttgcattt atatgaaaac cttctgtctc
2041 taatatcaca gaataaactt tctttagatg ctgttcttta aaaaaaaaaa aaaaaaa
//