LOCUS BC001803 1973 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
M, mRNA (cDNA clone MGC:3194 IMAGE:3357207), complete cds.
ACCESSION BC001803
VERSION BC001803.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1973)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1973)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21553314.
FEATURES Location/Qualifiers
source 1..1973
/db_xref="H-InvDB:HIT000258885"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3194 IMAGE:3357207"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1973
/gene="PIGM"
/gene_synonym="MGC29896"
/db_xref="GeneID:93183"
/db_xref="HGNC:HGNC:18858"
CDS 112..1383
/gene="PIGM"
/gene_synonym="MGC29896"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class M"
/protein_id="AAH01803.1"
/db_xref="GeneID:93183"
/db_xref="HGNC:HGNC:18858"
/translation="MGSTKHWGEWLLNLKVAPAGVFGVAFLARVALVFYGVFQDRTLH
VRYTDIDYQVFTDAARFVTEGRSPYLRATYRYTPLLGWLLTPNIYLSELFGKFLFISC
DLLTAFLLYRLLLLKGLGRRQACGYCVFWLLNPLPMAVSSRGNADSIVASLVLMVLYL
IKKRLVACAAVFYGFAVHMKIYPVTYILPITLHLLPDRDNDKSLRQFRYTFQACLYEL
LKRLCNRAVLLFVAVAGLTFFALSFGFYYEYGWEFLEHTYFYHLTRRDIRHNFSPYFY
MLYLTAESKWSFSLGIAAFLPQLILLSAVSFAYYRDLVFCCFLHTSIFVTFNKVCTSQ
YFLWYLCLLPLVMPLVRMPWKRAVVLLMLWFIGQAMWLAPAYVLEFQGKNTFLFIWLA
GLFFLLINCSILIQIISHYKEEPLTERIKYD"
BASE COUNT 461 a 471 c 454 g 587 t
ORIGIN
1 gcctggcggg tgggagatgc ggcggccacc tgctgcaaag aaccgaaggg aaggttagaa
61 gtacgaaggc agtttggagc tggggctaag cagctgtcgc acggtcagat catgggctcc
121 accaagcact ggggcgaatg gctcctgaac ttgaaggtgg ctccagccgg cgtctttggt
181 gtggcctttc tagccagagt cgccctggtt ttctatggcg tcttccagga ccggaccctg
241 cacgtgaggt atacggacat cgactaccag gtcttcaccg acgccgcgcg cttcgtcacg
301 gaggggcgct cgccttacct gagagccacg taccgttaca ccccgctgct gggttggctc
361 ctcactccca acatctacct cagcgagctc tttggaaagt ttctcttcat cagctgcgac
421 ctcctcaccg ctttcctctt ataccgcctg ctgctgctga aggggctggg gcgccgccag
481 gcttgtggct actgtgtctt ttggcttctt aaccccctgc ctatggcagt atccagccgc
541 ggtaatgcgg actctattgt cgcctccctg gtcctgatgg tcctctactt gataaagaaa
601 agactcgtcg cgtgtgcagc tgtattctat ggtttcgcgg tgcatatgaa gatatatcca
661 gtgacttaca tccttcccat aaccctccac ctgcttccag atcgcgacaa tgacaaaagc
721 ctccgtcaat tccggtacac tttccaggct tgtttgtacg agctcctgaa aaggctgtgt
781 aatcgggctg tgctgctgtt tgtagcagtt gctggactca cgttttttgc cctgagcttt
841 ggtttttact atgagtacgg ctgggaattt ttggaacaca cctactttta tcacctgact
901 aggcgggata tccgtcacaa cttttctccg tacttctaca tgctgtattt gactgcagag
961 agcaagtgga gtttttccct gggaattgct gcattcctgc cacagctcat cttgctttca
1021 gctgtgtctt tcgcctatta cagagacctc gttttttgtt gttttcttca tacgtccatt
1081 tttgtgactt ttaacaaagt ctgcacctcc cagtactttc tttggtacct ctgcttactg
1141 cctcttgtga tgccactagt cagaatgcct tggaaaagag ctgtagttct cctaatgtta
1201 tggtttatag ggcaggccat gtggctggct cctgcctatg ttctagagtt tcaaggaaag
1261 aacacctttc tgtttatttg gttagctggt ttgttctttc ttcttatcaa ttgttccatc
1321 ctgattcaaa ttatttccca ttacaaagaa gaacccctga cagagagaat caaatatgac
1381 tagtgtatgt tccacaccct ctgctactgt gttacattct gattgtcttg tatggaccag
1441 aagagagctt tgggacattt tttctgaaca ttctaagcat tctagtgaaa gttcccatgt
1501 tccaacagaa cttaaaagca atgtttgcct tatatataaa agggacacaa taattgaggt
1561 ccaccttcta ggaaatccta ggactcgttt atttgggaca tggtgggaat aaaggtcaca
1621 tattggaaaa tggaaaggct gatgaaacta tcagatacta aaacattctt aaaatagagg
1681 aatatagtta gagacatcag gtttaagcca gtatttgttc ctgttttaca atgcttctgt
1741 cttaagctgt gtcttaactt ttaacaccca tcttttcttt ctaaagcttt cctgacagct
1801 gtgaaaatcc aaaaaatatt cttaaactgt gtatggtggc ccttgcctgt agtctcagca
1861 ctttgggagg ctgaggtggg agggtcgctt gagttcagga gttctagacc cacctggggc
1921 aagatggtga gacctagtct caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//