LOCUS       BC001800                2702 bp    mRNA    linear   HUM 22-FEB-2007
DEFINITION  Homo sapiens orthopedia homeobox, mRNA (cDNA clone MGC:3161
            IMAGE:3354882), complete cds.
ACCESSION   BC001800
VERSION     BC001800.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2702)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2702)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 6 Row: f Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 24497624.
FEATURES             Location/Qualifiers
     source          1..2702
                     /db_xref="H-InvDB:HIT000030661"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:3161 IMAGE:3354882"
                     /tissue_type="Eye, retinoblastoma"
                     /clone_lib="NIH_MGC_16"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2702
                     /gene="OTP"
                     /db_xref="GeneID:23440"
                     /db_xref="HGNC:HGNC:8518"
                     /db_xref="MIM:604529"
     CDS             149..1126
                     /gene="OTP"
                     /codon_start=1
                     /product="orthopedia homeobox"
                     /protein_id="AAH01800.1"
                     /db_xref="GeneID:23440"
                     /db_xref="HGNC:HGNC:8518"
                     /db_xref="MIM:604529"
                     /translation="MLSHADLLDARLGMKDAAELLGHREAVKCRLGVGGSDPGGHPGD
                     LAPNSDPVEGATLLPGEDITTVGSTPASLAVSAKDPDKQPGPQGGPNPSQAGQQQGQQ
                     KQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWK
                     KRKKTTNVFRAPGTLLPTPGLPQFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPGVS
                     QLPLPPALGRQQAMAQSLSQCSLAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGM
                     VPASLPGPSNVSGSPQLCSSPDSSDVWRGTSIASLRRKALEHTVSMSFT"
BASE COUNT          543 a          896 c          670 g          593 t
ORIGIN      
        1 cccccttttt aaccacaaac cgaattttct ttcatttagg tgatctatat atatctatat
       61 cgtatagctt atagcttata tctattttaa ataacttaaa gccgctaaaa tttggggggg
      121 aacagctttc gccctggagc ggtgcgcgat gctgtctcat gccgacctcc tggacgccag
      181 gctaggtatg aaagatgccg ccgagcttct gggccaccgg gaggcggtga agtgtaggct
      241 gggcgtgggg ggctccgacc ccgggggcca tccgggggac ctggcgccca actctgaccc
      301 agtggaggga gccactctgc tgcccgggga ggacatcacc acagtgggct ctactccggc
      361 ctcgctggcg gtgagcgcca aagacccgga caagcagccc gggccccagg gcggcccgaa
      421 ccccagccaa gccggccagc agcagggcca acagaagcag aagcgccacc ggacgcgctt
      481 cacccccgca cagctcaacg agttggagag gagcttcgcc aagactcact accccgacat
      541 ctttatgcgt gaggagctgg cactgcgtat cgggctgacc gagtcccgag tgcaggtctg
      601 gttccagaac cgacgcgcca agtggaagaa gcgcaagaag acgaccaacg tgttccgtgc
      661 gcccggcaca ctgctgccca cgccaggcct gcctcagttc ccgtcggctg ccgccgccgc
      721 tgccgccgcc atgggcgaca gcctgtgctc tttccacgcc aacgacaccc gctgggcggc
      781 ggccgccatg cctggcgtgt cacagctgcc tctgccgccg gcgctgggca ggcagcaggc
      841 catggcgcag tcgctgtccc agtgcagcct ggcggccggt ccgccgccca actccatggg
      901 cctgtccaac agcctggcgg gttccaacgg cgcggggctg cagtcgcacc tctaccagcc
      961 cgccttcccc ggcatggtgc ccgcctccct ccccggcccc agcaacgtct ccggttcgcc
     1021 ccagctctgc agctccccgg acagcagcga cgtgtggcgg ggcaccagca tcgcctccct
     1081 ccgccgcaag gcgctagagc acacagtctc tatgagcttc acttaatgca gccgcgcccc
     1141 ggcccgctcc gcccccagca ccgccccggg ggccgccccg aggcccttcc ggcgcgcacc
     1201 cggaccccgg cgccctgccc cgtcccgccc cggccttcgc cccgtctcgt ttcgtcctcg
     1261 cctctctcct ccactcgctc gggctcaccc caagccccag cccgcgaggc ctcccctccg
     1321 cctgatttcg atcgcccgcg gtcccccgtc tcccggccgc ccctcttccc ttcccaccca
     1381 gctgcgccct cggctcggtc tccagcgcct cagcccaccc ttcccgccac cctggcctcc
     1441 ctgctggcgc tggccgtgct cgcgccctcc tcctggcctt ctgacgggcg gcgttcccac
     1501 ccacaccttc gacgcgacgc ctacgacccc cctcgcccgc cgcctcccct ccggtcccct
     1561 ctttccccac acttcgcgac cctcctcccg cgcccggcaa aaagtatcct tcccgccatt
     1621 ttacgtacca gggagtcgac tcaggatctg aaatcagaca ccaatggact ggtttgtggg
     1681 cagaaacaca cacactcgca ctctcgctca cgctcagacg ctacacacgc gcgcgcacag
     1741 acacggtgca cctaggtcac acacggacgt gttcaaggga cagcacaatg ttagggattt
     1801 ttgtcttaaa ggaggacaag cattgctacc aaccgcctca tctgagggcc caactgatat
     1861 gatttgattt atccttgtac tctccaagct cctgtctttc tttcctctcc caccacgcta
     1921 cccttgccca gtccacccag tcacatccgt gcagccctct cttggcttgc aagataacgc
     1981 ttttattttt attttatctt attttcattt tcttaagcac aactgtgtga gagtgtagaa
     2041 gggaaggctt ctcaggagga acgtgacagt ggattgggtg gctggagtag actaaagcag
     2101 tcatgtgacg aggaagaggt gatctgaccc attttgataa gtctttataa ggaagaataa
     2161 aataaacgtg taagcaaaat tttcttttgt aaaagcaaaa gccacatctc ttttctggat
     2221 ccttcaggac tggggtttgt ttgcttcctt ttctgtttct gtcttctcgc tgctctgtgc
     2281 ccttggttgt tttgtggtgg tcctgtcgtc cctcgtgccc ctcggccacc tgctggcagc
     2341 cgatgggggc actcggacat ctacaaccct gcaactttgt acagagaaac acaatcagct
     2401 ctttctgcat gtgctggtca aatccaaacc cagagaacag aagcgctttc taagaatgaa
     2461 caaatatgtg aaataggatg ttttgtgtag ataaagcatt cttgttacat actggtcaat
     2521 ttgtgatatg ttttaactta atgtctgtgt ttatttatgg aattcggttt tcttaataaa
     2581 tgtttgagct aatataaagc atattatttg acttttccgg acaagtttat atcaagttaa
     2641 atgtaaatgg ataaaataaa atcattttca gtatgtgaaa aaaaaaaaaa aaaaaaaaaa
     2701 aa
//