LOCUS BC001789 1865 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens kelch domain containing 3, mRNA (cDNA clone MGC:2612
IMAGE:3355470), complete cds.
ACCESSION BC001789
VERSION BC001789.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1865)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1865)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: f Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17149812.
FEATURES Location/Qualifiers
source 1..1865
/db_xref="H-InvDB:HIT000030652"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2612 IMAGE:3355470"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1865
/gene="KLHDC3"
/gene_synonym="dJ20C7.3"
/gene_synonym="hPeas"
/gene_synonym="PEAS"
/gene_synonym="RP1-20C7.3"
/db_xref="GeneID:116138"
/db_xref="HGNC:HGNC:20704"
CDS 141..1289
/gene="KLHDC3"
/gene_synonym="dJ20C7.3"
/gene_synonym="hPeas"
/gene_synonym="PEAS"
/gene_synonym="RP1-20C7.3"
/codon_start=1
/product="kelch domain containing 3"
/protein_id="AAH01789.1"
/db_xref="GeneID:116138"
/db_xref="HGNC:HGNC:20704"
/translation="MLRWTVHLEGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQI
DVHIFNAVSLRWTKLPPVKSAIRGQAPVVPYMRYGHSTVLIDDTVLLWGGRNDTEGAC
NVLYAFDVNTHKWFTPRVSGTVPGARDGHSACVLGKIMYIFGGYEQQADCFSNDIHKL
DTSTMTWTLICTKGSPARWRDFHSATMLGSHMYVFGGRADRFGPFHSNNEIYCNRIRV
FDTRTEAWLDCPPTPVLPEGRRSHSAFGYNGELYIFGGYNARLNRHFHDLWKFNPVSF
TWKKIEPKGKGPCPRRRQCCCIVGDKIVLFGGTSPSPEEGLGDEFDLIDHSDLHILDF
SPSLKTLCKLAVIQYNLDQSCLPHDIRWELNAMTTNSNISRPIVSSHG"
BASE COUNT 379 a 521 c 526 g 439 t
ORIGIN
1 aaggcgtcgg ttggcgcgca acgggttcta ggctgcaggc agctcgagga cccgcggccc
61 cgccccggct cggcctggca gatagcagag gcagcaggcc gtgccggggg ggcatgttgc
121 tgtaaccagt ggcccagggg atgttacggt ggacagtgca cctggagggc gggccccgca
181 gggtgaacca tgctgcagtg gctgtcgggc atcgggtata ctccttcggg ggttactgct
241 ctggtgaaga ctatgagaca ctgcgtcaga tagatgtgca cattttcaat gcagtgtcct
301 tgcgttggac aaagctgccc ccggtgaagt ctgccatccg tgggcaagct cctgtggtac
361 cctacatgcg ctatggacac tcaaccgtcc tcatcgacga cacagtcctc ctttggggcg
421 ggcggaatga caccgaaggg gcctgcaatg tgctctatgc ctttgacgtc aatacgcaca
481 agtggttcac accccgagtg tcagggacag ttcctggggc ccgggatgga cattcagcct
541 gtgtcctagg caagatcatg tacatttttg ggggctacga gcagcaggcg gactgttttt
601 ccaatgacat tcacaagcta gataccagca ccatgacatg gactcttatc tgtacaaagg
661 gcagccctgc acgctggagg gacttccact cagccacaat gctgggaagt cacatgtatg
721 tctttggggg ccgtgccgac cgctttgggc cattccattc caacaatgag atttactgca
781 accgcattcg agtctttgac accagaactg aggcttggct ggactgtccc ccgactccag
841 tgctgcctga ggggcgccgg agccactcgg cctttggcta caatggggag ctgtacatct
901 ttggtggtta taatgcaagg ctgaaccggc acttccatga cctctggaag tttaatcctg
961 tgtcctttac ctggaaaaag attgaaccga aggggaaggg gccatgtccc cgccggcgcc
1021 agtgctgctg tattgttggt gacaagattg tcctctttgg gggtaccagt ccatctcctg
1081 aggaaggcct gggagatgaa tttgacctta tagatcattc tgacttacac attttggact
1141 ttagccctag tctgaagact ctgtgcaaac tggccgtgat tcagtataac ctagaccagt
1201 cctgtttgcc tcatgatatc aggtgggagc tgaatgccat gaccaccaac agcaatatca
1261 gtcgccccat cgtctcctcc catgggtagg aggaagtttc tgccacctcc cctcctgagc
1321 ctgctgtcat cttcactgcc cctgcccatc tgtcacccac ctgctccttt gacccctgga
1381 cttggtatac ctccatgtgg agttgttggg cgagaggtgt tctctgtgct gtgaattcag
1441 tggggagctg tagcggggtg ggggctaggt tcctcccccc ttgggccgag ggccccttcc
1501 ccttggtgct ctgtccccat ccacctcctt tcagctgctc ctgggcctca gctctgccca
1561 gggccagcca ggttctgctg ggaagggaag ggaatgggga gaagggagaa gcaagcagtg
1621 tctgagcctc aggagcttcc ccctccccct ttgcctatcc cctcccctct gcttgagcct
1681 tgagccttga ctgggagctg aaaggagttg cagctgttgg catgagacct ccttctcccc
1741 gtcttgggga ggtggggacc agcagataaa tcccaccctt ccttgagctg tcgctgtact
1801 ctgaagttca gccagctcag attttataaa aattaattaa aatctccaaa aaaaaaaaaa
1861 aaaaa
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