LOCUS BC001766 759 bp mRNA linear HUM 21-SEP-2006
DEFINITION Homo sapiens S100 calcium binding protein B, mRNA (cDNA clone
MGC:1323 IMAGE:3543825), complete cds.
ACCESSION BC001766
VERSION BC001766.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 759)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 759)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: o Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5454033.
FEATURES Location/Qualifiers
source 1..759
/db_xref="H-InvDB:HIT000030635"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1323 IMAGE:3543825"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..759
/gene="S100B"
/gene_synonym="NEF"
/gene_synonym="S100"
/gene_synonym="S100beta"
/db_xref="GeneID:6285"
/db_xref="HGNC:HGNC:10500"
/db_xref="MIM:176990"
CDS 63..341
/gene="S100B"
/gene_synonym="NEF"
/gene_synonym="S100"
/gene_synonym="S100beta"
/codon_start=1
/product="S100 calcium binding protein B"
/protein_id="AAH01766.1"
/db_xref="GeneID:6285"
/db_xref="HGNC:HGNC:10500"
/db_xref="MIM:176990"
/translation="MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHF
LEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFVAMVTTACHEFFEHE"
BASE COUNT 232 a 171 c 192 g 164 t
ORIGIN
1 gacccgcagc agagacgacg cctgcagcaa ggagaccagg aaggggtgag acaaggaaga
61 ggatgtctga gctggagaag gccatggtgg ccctcatcga cgttttccac caatattctg
121 gaagggaggg agacaagcac aagctgaaga aatccgaact caaggagctc atcaacaatg
181 agctttccca tttcttagag gaaatcaaag agcaggaggt tgtggacaaa gtcatggaaa
241 cactggacaa tgatggagac ggcgaatgtg acttccagga attcatggcc tttgttgcca
301 tggttactac tgcctgccac gagttctttg aacatgagtg agattagaaa gcagccaaac
361 ctttcctgta acagagacgg tcatgcaaga aagcagacag caagggcttg cagcctagta
421 ggagctgagc tttccagccg tgttgtagct aattaggaag cttgatttgc tttgtgattg
481 aaaaattgaa aacctctttc caaaggctgt tttaacggcc tgcatcattc tttctgctat
541 attaggcctg tgtgtaagct gactggcccc agggactctt gttaacagta acttaggagt
601 caggtctcag tgataaagcg tgcaccgtgc agcccgccat ggccgtgtag accctaaccc
661 ggagggaacc ctgactacag aaattacccc ggggcaccct taaaacttcc actaccttta
721 aaaaacaaag ccttatccag caaaaaaaaa aaaaaaaaa
//