LOCUS BC001765 4197 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens stromal antigen 2, mRNA (cDNA clone MGC:1282
IMAGE:3352347), complete cds.
ACCESSION BC001765
VERSION BC001765.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4197)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4197)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31563530.
FEATURES Location/Qualifiers
source 1..4197
/db_xref="H-InvDB:HIT000030634"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1282 IMAGE:3352347"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4197
/gene="STAG2"
/gene_synonym="bA517O1.1"
/gene_synonym="SA-2"
/gene_synonym="SA2"
/db_xref="GeneID:10735"
/db_xref="HGNC:HGNC:11355"
/db_xref="MIM:604359"
CDS 198..3893
/gene="STAG2"
/gene_synonym="bA517O1.1"
/gene_synonym="SA-2"
/gene_synonym="SA2"
/codon_start=1
/product="stromal antigen 2"
/protein_id="AAH01765.2"
/db_xref="GeneID:10735"
/db_xref="HGNC:HGNC:11355"
/db_xref="MIM:604359"
/translation="MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCK
KGKKGPAEKGKGGNGGGKPPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDW
IESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYP
LTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHT
STLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKELQE
NQDEIENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGW
TMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIK
LLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRDPEEDGMMKR
RGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATELLKDWECMNSLLLEEPLS
GEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDRTKITEL
FAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEKHT
DTDVLEACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDED
DAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYV
ILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTTVKEQAFTILCDILMIF
SHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSADGQQEDEASKIE
ALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQIDKIQ
CAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAM
LHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQM
SLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGM
QLSLTEESSSSDSMWLSREQTLHTPVMMQTPQLTSTIMREPKRLRPEDSFMSVYPMQT
EHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNR
RERTELKPDFFDPASIMDESVLGVSMF"
BASE COUNT 1391 a 704 c 940 g 1162 t
ORIGIN
1 ctgcttctcc cccgccccat catctccagc gcgtggtggg ggaactgctg gggaaggcga
61 ttggcatcga tctctccatc ccttccgagg cccgacttcg gaattgtctt agaagaaaga
121 aggcaagcca ccattttacc cacgtaaata tatgaatata tttctgacat tgaggtgttc
181 cagaagatga taaagaaatg atagcagctc cagaaatacc aactgatttt aatctactac
241 aggagtcaga aacacatttt tcttctgaca cagattttga agatatcgaa ggaaaaaacc
301 aaaagcaagg caaaggcaaa acttgtaaaa aaggcaaaaa gggcccagca gaaaagggca
361 aaggtggaaa tggaggagga aaacctcctt ctggtccaaa ccgaatgaat ggtcatcacc
421 aacagaatgg agtggaaaac atgatgttgt ttgaagttgt taaaatgggc aagagtgcta
481 tgcagtcggt ggtagatgat tggatagaat catacaagca tgaccgagat atagcacttc
541 ttgaccttat caactttttt attcagtgtt caggctgtaa aggagttgtc acagcagaaa
601 tgtttagaca tatgcagaac tctgagataa ttcgaaaaat gactgaagaa ttcgatgagg
661 atagtggaga ttatccactt accatggctg gtcctcagtg gaagaagttc aaatccagtt
721 tttgtgaatt cattggcgtg ttagtacggc aatgtcaata tagtatcata tatgatgagt
781 atatgatgga tacagtcatt tcacttctta caggattgtc tgactcacaa gtcagagcat
841 ttcgacatac aagcaccctg gcagctatga agttgatgac agctttggtg aatgtggcac
901 taaatcttag cattaatatg gataatacac aaagacaata tgaagcagaa cggaataaaa
961 tgattggaaa acgagccaat gagaggctag aactcctgct acaaaagcgg aaagagcttc
1021 aggaaaatca agatgaaata gaaaatatga tgaatgcaat atttaaagga gtgtttgtac
1081 atagataccg tgatgcgata gctgaaattc gagctatttg cattgaagag attggcattt
1141 ggatgaagat gtatagtgat gcctttctta atgacagtta tttaaaatat gttggttgga
1201 ctatgcatga taagcaaggt gaagtaagac tcaaatgtct tactgctcta caagggcttt
1261 attataacaa agagcttaat tccaaactgg aactttttac cagtcggttc aaggatagaa
1321 ttgtgtctat gacccttgac aaagaatatg atgttgcagt acaagcaata aaattactca
1381 ctcttgtttt acagagtagt gaagaagttc tcactgcaga agattgtgaa aatgtctatc
1441 atctggttta ttcagctcac cggccagtag cagtagcagc tggagaattt ctctacaaaa
1501 agctcttcag tcgtagagat ccagaggagg atggaatgat gaaaagaaga ggaagacaag
1561 gtccaaatgc caaccttgtt aagacattgg tttttttctt tctagaaagt gagttacatg
1621 agcatgcagc ataccttgtg gatagcatgt gggactgtgc tactgagctg ctgaaagact
1681 gggaatgtat gaatagcttg ttactggaag agccacttag tggagaggaa gcactaacag
1741 ataggcaaga gagtgctctg attgaaataa tgctttgtac cattagacaa gcggctgaat
1801 gtcatcctcc cgtgggaaga gggacaggaa aaagggtgct tacagcaaag gagaagaaga
1861 cacagttgga tgataggaca aaaatcactg agctttttgc cgtggccctt cctcagttat
1921 tagcaaaata ctctgtagat gcagaaaagg tgactaactt gttgcagttg cctcagtact
1981 ttgatttgga aatatatacc actggacgat tagaaaagca tttggatgcc ttattgcgac
2041 agatccggaa tattgtagag aagcacacag atacagatgt tttggaagca tgttctaaaa
2101 cttaccatgc actctgtaat gaagagttca caatcttcaa cagagtagat atttcaagaa
2161 gtcaactgat agatgaattg gcagataaat ttaaccggct tcttgaagat tttctgcaag
2221 agggtgaaga acctgatgaa gatgatgcat atcaggtatt gtcaacattg aagaggatca
2281 ctgcttttca taatgcccat gacctttcaa agtgggattt atttgcttgt aattacaaac
2341 tcttgaaaac tggaatcgaa aatggagaca tgcctgagca gattgttatt cacgcactgc
2401 agtgtactca ctatgtaatc ctttggcaac ttgctaagat aactgaaagc agctctacaa
2461 aggaggactt gctgcgttta aagaaacaaa tgagagtatt ttgtcagata tgtcaacatt
2521 acctgaccaa cgtgaatact actgttaagg aacaggcctt cactattctg tgtgatattt
2581 tgatgatctt cagccatcag attatgtcag gagggcgtga catgttagag ccattagtgt
2641 atacccctga ttcttcattg cagtctgagt tgctcagctt tattttggat catgtcttca
2701 ttgaacagga tgatgataat aatagtgcag atggtcagca agaggatgaa gccagtaaaa
2761 ttgaagctct gcacaagaga agaaatttac ttgcagcatt ttgtaagcta attgtatata
2821 ctgtggtgga gatgaataca gctgcagata tcttcaaaca gtatatgaag tattataatg
2881 actatggaga tatcatcaaa gaaacaatga gtaaaacaag gcagatagac aaaattcagt
2941 gtgctaagac ccttattctc agtctgcaac agctttttaa tgaaatgata caagaaaatg
3001 gctataattt tgatagatca tcctctacat ttagtggcat aaaagaactt gctcgacgtt
3061 ttgctttaac ttttggactt gatcagttga aaacaagaga agccattgcc atgctacaca
3121 aagatggcat agaatttgct tttaaagagc ctaatccgca aggggagagc catccacctt
3181 taaatttggc atttcttgat attctgagtg aattttcttc taaactactt cgacaagaca
3241 aaagaacagt gtatgtttac ttggaaaagt tcatgacctt tcagatgtca ctccgaagag
3301 aggatgtgtg gcttccactg atgtcttacc gaaattcttt gctagctggt ggtgatgatg
3361 acaccatgtc agtcattagt ggaatcagca gccgggggtc aacagtacgg agtaaaaaat
3421 caaaaccatc tacaggaaaa cggaaagtgg ttgagggcat gcagctttca ctcactgaag
3481 aaagtagtag tagtgacagt atgtggttaa gcagagaaca aacactgcac acccctgtta
3541 tgatgcagac accacaactc acctccacta ttatgagaga gcccaaaaga ttacggcctg
3601 aggatagctt catgagtgtt tatccaatgc agactgaaca tcatcaaaca cctcttgatt
3661 ataatcggcg tggcacaagc ctaatggaag atgatgaaga gccaattgtg gaagatgtta
3721 tgatgtcctc agaagggagg attgaggatc ttaatgaggg aatggatttt gacaccatgg
3781 atatagattt gccaccatca aagaacagac gagagagaac agaactgaag cctgatttct
3841 ttgatccagc ttcaattatg gatgaatcag ttcttggagt gtcaatgttt taataccagt
3901 acacaattaa atctgtggtg aagtcatttt ctaagtggaa gaggaaattt taaagtgtgg
3961 tagatacagt gaaattctgt acagattttt ctctaaggag aatatgacat gcttatgctt
4021 accaagatca agtgcattga ggggcagttt tgtttgcctg aataaacgta aaggacaagt
4081 aaacaatttg atgataagct acagtttttc ttagaaagta aatattttat ttatgcgctg
4141 ttagttggct tttgaatcga ttatttcatg ctttttttta aaaaaaaaaa aaaaaaa
//