LOCUS BC001760 2857 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens replication initiator 1, mRNA (cDNA clone MGC:1081
IMAGE:3353279), complete cds.
ACCESSION BC001760
VERSION BC001760.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2857)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2857)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: f Column: 1.
FEATURES Location/Qualifiers
source 1..2857
/db_xref="H-InvDB:HIT000030631"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1081 IMAGE:3353279"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2857
/gene="REPIN1"
/gene_synonym="AP4"
/gene_synonym="RIP60"
/gene_synonym="Zfp464"
/db_xref="GeneID:29803"
/db_xref="HGNC:HGNC:17922"
CDS 15..1718
/gene="REPIN1"
/gene_synonym="AP4"
/gene_synonym="RIP60"
/gene_synonym="Zfp464"
/codon_start=1
/product="replication initiator 1"
/protein_id="AAH01760.1"
/db_xref="GeneID:29803"
/db_xref="HGNC:HGNC:17922"
/translation="MLERRCRGPLAMGLAQPRLLSGPSQESPQTLGKESRGLRQQGTS
VAQSGAQAPGRAHRCAHCRRHFPGWVALWLHTRRCQARLPLPCSECGRRFRHAPFLAL
HRQVHAAATPDLGFACHLCGQSFRGWVALVLHLRAHSAAKRPIACPKCERRFWRRKQL
RAHLRRCHPPAPEARPFICGNCGRSFAQWDQLVAHKRVHVAEALEEAAAKALGPRPRG
RPAVTAPRPGGDAVDRPFQCACCGKRFRHKPNLIAHRRVHTGERPHQCPECGKRFTNK
PYLTSHRRIHTGEKPYPCKECGRRFRHKPNLLSHSKIHKRSEGSAQAAPGPGSPQLPA
GPQESAAEPTPAVPLKPAQEPPPGAPPEHPQDPIEAPPSLYSCDDCGRSFRLERFLRA
HQRQHTGERPFTCAECGKNFGKKTHLVAHSRVHSGERPFACEECGRRFSQGSHLAAHR
RDHAPDRPFVCPDCGKAFRHKPYLAAHRRIHTGEKPYVCPDCGKAFSQKSNLVSHRRI
HTGERPYACPDCDRSFSQKSNLITHRKSHIRDGAFCCAICGQTFDDEERLLAHQKKHD
V"
BASE COUNT 553 a 964 c 817 g 523 t
ORIGIN
1 cagaggaaga accgatgctg gaacgtcgtt gcaggggccc cctggccatg ggcctggccc
61 agccccgact cctttctggg ccctcccagg agtcacccca gaccctgggg aaggagtccc
121 gcgggctgag gcaacaaggc acgtcagtgg cccagtctgg tgcccaagcc ccaggcaggg
181 cccatcgctg tgcccactgt cgaaggcact tccctggctg ggtggctctg tggcttcaca
241 cccgccggtg ccaggcccgg ctgcccttgc cctgctctga gtgtggccgt cgctttcgcc
301 atgccccctt cttagcactg caccgccagg tccatgctgc tgccacccca gacctgggct
361 ttgcctgcca cctctgtggg cagagcttcc gaggctgggt ggccctggtt ctgcatctgc
421 gggcccattc agctgcaaag cggcccatcg cttgtcccaa atgcgagaga cgcttctggc
481 gacgaaagca gcttcgagct catctgcggc ggtgccaccc tcccgccccg gaggcccggc
541 ccttcatatg cggcaactgt ggccggagct ttgcccagtg ggaccagcta gttgcccaca
601 agcgggtgca cgtagctgag gccctggagg aggccgcagc caaggctctg gggccccggc
661 ccaggggccg ccccgcggtg accgcccccc ggcccggtgg agatgccgtc gaccgcccct
721 tccagtgtgc ctgttgtggc aagcgcttcc ggcacaagcc caacttgatc gctcaccgcc
781 gcgtgcacac gggcgagcgg ccccaccagt gccccgagtg cgggaagcgc tttaccaata
841 agccctatct gacttcgcac cggcgcatcc acaccggcga gaagccctac ccgtgcaaag
901 agtgcggccg ccgcttccgg cacaaaccca acctgctgtc tcacagcaag attcacaagc
961 gatccgaggg gtcggcccag gccgcccccg gcccggggag cccccagctg ccagccggcc
1021 cccaggagtc cgcggccgag cccaccccgg cggtacctct gaaaccggcc caggagccgc
1081 cgccaggggc cccgccagag cacccgcagg acccgatcga agcccccccc tccctctaca
1141 gctgcgacga ctgcggcagg agcttccggc tggagcgctt cctgcgggcc caccagcggc
1201 agcacaccgg ggagcggccc ttcacctgcg ccgagtgcgg gaagaacttc ggcaagaaga
1261 cgcacctggt ggcgcactcg cgcgtgcact ccggcgagcg gcccttcgcc tgcgaggagt
1321 gcggccgccg cttctcccag ggcagccatc tggcggcgca tcggcgcgac cacgcccccg
1381 atcggccctt cgtgtgtccc gactgcggca aggccttccg ccacaaaccc tacctggcgg
1441 cgcaccggcg catccacacc ggcgagaagc cctacgtctg ccccgactgc ggcaaagcct
1501 tcagccagaa gtccaacctg gtgtcgcacc ggcgcatcca cacgggcgag cggccctacg
1561 cctgtcccga ctgcgaccgc agcttcagcc agaagtccaa cctcatcacc caccgcaaga
1621 gccacatccg ggacggcgcc ttctgctgtg ccatctgtgg ccagaccttc gacgacgagg
1681 agagactcct ggcccaccag aagaagcacg atgtctgaga cggtgggcgg ggccgtgttg
1741 gctgagagag ggctggggtc cttcgtggtg ggagtcgcag tgggctgtgg gtgcctgcct
1801 agtgctggag taggggacaa tgggaatcct agaggggatg gaagacgcgg ggagtgagct
1861 gggtgggccc tgctagcgag agaggtcaac cccggtggcc agggaaccca cttccaagcg
1921 cagggacgcc ggcctccagc tggtgtgtgc taaggctccg tcctgactgc cctgtgccct
1981 ggaaaagcag caatagcatc cgccccttag agccctctgg ctagaggagc caccagtgga
2041 aaggaagacc ctccatcctc tggtattaac gccttaatgc ccctgtcttt tactgtaagt
2101 tacttaagat catttttgga agcaggcgtg gtagagtcct gtaaatgaat gctctgggct
2161 agatacagct tggagaacct gctggccttg ttagacagca cttgggcctt tgccagcagc
2221 aagaggtgaa gcgaagccac tcttacctct cccttcccct cccacctgcc ccctgcgtag
2281 gcacccagac ttggagagac ccgtctgctg ttaatacttc catcctcttc cttcccaaag
2341 agcagatccc aaggcattta ctccttggtc tgtctcgctt tatctgtcgc ccctcccagc
2401 gctgagagcc tcccctggct gtcagcagca ctgtgtccag gctcttgtct gaacaccgca
2461 gcccctcctt cgctccttcc agagctcagc atgtcacggc aaggactgcc gcattggtga
2521 tggagggcca gctgagggga agttgctggt gagtttcctt ttctccattt ctagcatatg
2581 gacacctggc ctctgcttga gcacttaggt gacaggaact tccgcacctc ctgaggccct
2641 ggatgattct aattgttaga aattctaatt gttagaaatc cttccttata atgaatgaat
2701 tctgctttcc tataatttct acctattggg ccttgttctg ttctctggaa ctaaacagaa
2761 caaccattta cccctccttt tcaaactaga gaataaagat ttggttttag aaaaaaaaaa
2821 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//