LOCUS BC001746 3293 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens protein tyrosine phosphatase, non-receptor type 7, mRNA (cDNA clone MGC:2258 IMAGE:3543111), complete cds. ACCESSION BC001746 VERSION BC001746.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3293) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3293) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 8 Row: i Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18375659. FEATURES Location/Qualifiers source 1..3293 /db_xref="H-InvDB:HIT000030620" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2258 IMAGE:3543111" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3293 /gene="PTPN7" /gene_synonym="BPTP-4" /gene_synonym="HEPTP" /gene_synonym="LC-PTP" /gene_synonym="LPTP" /gene_synonym="PTPNI" /db_xref="GeneID:5778" /db_xref="HGNC:HGNC:9659" /db_xref="MIM:176889" CDS 473..1672 /gene="PTPN7" /gene_synonym="BPTP-4" /gene_synonym="HEPTP" /gene_synonym="LC-PTP" /gene_synonym="LPTP" /gene_synonym="PTPNI" /codon_start=1 /product="protein tyrosine phosphatase, non-receptor type 7" /protein_id="AAH01746.2" /db_xref="GeneID:5778" /db_xref="HGNC:HGNC:9659" /db_xref="MIM:176889" /translation="MGASFWPIRQAREQQRRALSFRQTSWLSEPPLGPAPHLSMVQAH GGRSRAQPLTLSLGAAMTQPPPEKTPAKKHVRLQERRGSNVALMLDVRSLGAVEPICS VNTPREVTLHFLRTAGHPLTRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHAS KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDF WEMVWQEEVSLIVMLTQLREGKEKCVHYWPTEEETYGPFQIRIQDMKECPEYTVRQLT IQYQEERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGI GRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALYAGQ LPEEPSP" BASE COUNT 781 a 989 c 853 g 670 t ORIGIN 1 ccagaaacag acctgggagt ggaacagcag cagttaggag aggaccctgc tggggtccag 61 gagcccgcct gcctggctgc ccaaccagct ccaacactgc tggaggcctc cattctctgt 121 tcaggggaag gcccactggt tagctcagag atggcttctg cgtgctttct cccttccgtc 181 ctagagaaca catattttct gtttcctccc ttgccttctc ccacttggac ctgctcagag 241 ccctgtgtac tctggtgtgt ggcctctctc ccctctctct tttcctcctt ctggattctt 301 tcctatcttc atccacaatc tctacccttt atcttgccgt tactctaccc cgagactgcc 361 ttctgccctg ggtcccacca aatagatcct gtccttccct tagtgaaaat gaggccacct 421 cttggggaac agaagacgcc ccagtgaaaa cagagtgcaa acctggcctg gcatgggagc 481 ctccttctgg ccaatcaggc aggccagaga acagcagcgg agggccctgt ctttcaggca 541 gacctcatgg ctgagtgagc ctcccctggg cccagcaccc cacctcagca tggtccaagc 601 ccatgggggg cgctccagag cacagccgtt gaccttgtct ttgggggcag ccatgaccca 661 gcctccgcct gaaaaaacgc cagccaagaa gcatgtgcga ctgcaggaga ggcggggctc 721 caatgtggct ctgatgctgg acgttcggtc cctgggggcc gtagaaccca tctgctctgt 781 gaacacaccc cgggaggtca ccctacactt tctgcgcact gctggacacc cccttacccg 841 ctgggccctt cagcgccagc cacccagccc caagcaactg gaagaagaat tcttgaagat 901 cccttcaaac tttgtcagcc ccgaagacct ggacatccct ggccacgcct ccaaggaccg 961 atacaagacc atcttgccaa atccccagag ccgtgtctgt ctaggccggg cacagagcca 1021 ggaggacgga gattacatca atgccaacta catccgaggc tatgacggga aggagaaggt 1081 ctacattgcc acccagggcc ccatgcccaa cactgtgtcg gacttctggg agatggtgtg 1141 gcaagaggaa gtgtccctca ttgtcatgct cactcagctc cgagagggca aggagaaatg 1201 tgtccactac tggcccacag aagaggaaac ctatggaccc ttccagatcc gcatccagga 1261 catgaaagag tgcccagaat acactgtgcg gcagctcacc atccagtacc aggaagagcg 1321 ccggtcagta aagcacatcc tcttttcggc ctggccagac catcagacac cagaatcagc 1381 tgggcccctg ctgcgcctag tggcagaggt ggaggagagc ccggagacag ccgcccaccc 1441 cgggcctatc gtagtccact gcagtgcagg gattggccgg acgggctgct tcatcgccac 1501 gcgaattggc tgtcaacagc tgaaagcccg aggagaagtg gacattctgg gtattgtgtg 1561 ccaactgcgg ctagacagag gggggatgat ccagacggca gagcagtacc agttcctgca 1621 ccacactttg gccctgtatg caggccagct gcctgaggaa cccagcccct gacccctgcc 1681 accctccggt ggcccaggtg cctacctccc tcaagcctgg gaaggtgggt ctggggaaag 1741 tgggccgagt gatctggggg taccccttgg gttggtgtgg ggaaggagtg cctccttagt 1801 ggtgcttgca gtcacaggaa gcagcagcag taaggacaag gggccggatt ccaggtcttc 1861 aacactggcc actcctctgc ttcctctgtt ggccccagat ggacagtaag gggaacctcc 1921 aatgtctctc tgaacttaaa gacaggagct ggcatttatg acagacaaag aaagaagccc 1981 aggtgtcctg gtgttctctg agacactctt tgtgagcttc agtttcctgt tctataacat 2041 gaacataagt gcttagctgc catgagggaa aagtaatgag agaagtttct agaagccact 2101 ccagccactc cttcctgggg ctgacaaaag ggtgattcca agatcatcct tcacccgagg 2161 tcctgcccaa gcacaggcca gatgcaagaa tggggaaaag tctggtcctg atctccaagt 2221 ctcaacatcc tatcagtgac tctgctccct gaccacacat cggaagggct ggatgacccc 2281 aatcaaaaga aagaacaagg actctggtta cccttgcctc cacccatgtg tcataagagt 2341 aggctacaga ggtgaccagg cctggcagtt gaaatctctg gaagagggaa catgtgggga 2401 ctactcagag gcaaagagga gctgctcctg cctccatggt tgctggcctc tcccaccaac 2461 tactcttagg gaggctaagc agtctctgtt ttgcttccat ggctcaaata ataccctggg 2521 tatgcaggac ccactatacc ttgcatttgc tgagtacacc tagagagctt ggctgtttcc 2581 aaaaacaatc agggtcataa ccatccatgc agacatggag gctcggctga accaggactc 2641 ctcactgtct acctgagaga atgagcaccc ctcatccatc tcagcatcaa cacaatttcc 2701 aggggacctc aggtctacct caggactgaa cgccacacct caggattcct cctccttgaa 2761 tctgagactg gctgcccatt ctgagatggg gatgaaggta agatgccgca tcaccaggca 2821 cgccgcccct gacagctgcc ttgataccag ctctctgtgg aaacccccga ggagttggat 2881 ctggagaaca gctgggcctc ctcactcagg acttctctcc tgaagaacac gcagtgctaa 2941 aactgaggat gatttcccta atgcttctgc ttggccttat ggaggagctg ctccttcctt 3001 acagccttgg ggatggactt gcccacacct ccacctcccc tgagccctgt gagaggcacg 3061 actgtctatg ccaatgaggc tcggtggggg gctctcaagt gcctgatcct gccctgggct 3121 cagagccagc ccagagggaa gcaactgcac agccccacag gccctccttg gcactgtccc 3181 cccaacccca tctcagagct cagagggtac aagctccaga acagtaacca agtgggaaaa 3241 taaagacttc ttggatgact gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //