LOCUS BC001718 2382 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens v-crk sarcoma virus CT10 oncogene homolog (avian), mRNA (cDNA clone MGC:3138 IMAGE:3353237), complete cds. ACCESSION BC001718 VERSION BC001718.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2382) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2382) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: h Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41327709. FEATURES Location/Qualifiers source 1..2382 /db_xref="H-InvDB:HIT000258884" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3138 IMAGE:3353237" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2382 /gene="CRK" /gene_synonym="CRKII" /db_xref="GeneID:1398" /db_xref="HGNC:HGNC:2362" /db_xref="MIM:164762" CDS 103..1017 /gene="CRK" /gene_synonym="CRKII" /codon_start=1 /product="v-crk sarcoma virus CT10 oncogene homolog (avian)" /protein_id="AAH01718.1" /db_xref="GeneID:1398" /db_xref="HGNC:HGNC:2362" /db_xref="MIM:164762" /translation="MAGNFDSEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSP GDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLE FYKIHYLDTTTLIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILR IRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASASVSALIGGNQEGSHPQPLGGPEP GPYAQPSVNTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWE GECNGKRGHFPFTHVRLLDQQNPDEDFS" BASE COUNT 588 a 568 c 650 g 576 t ORIGIN 1 ctgtgaagct gaaaccggag ccggtccgct gggcggcggg cgccgggggc cggaggggcg 61 cgcgcggcgg cggcacccca gcgtttaggc gcggaggcag ccatggcggg caacttcgac 121 tcggaggagc ggagtagctg gtactggggg cggttgagtc ggcaggaggc ggtggcgctg 181 ctgcagggcc agcggcacgg ggtgttcctg gtgcgggact cgagcaccag ccccggggac 241 tatgtgctca gcgtctcaga gaactcgcgc gtctcccact acatcatcaa cagcagcggc 301 ccgcgcccgc cggtgccacc gtcgcccgcc cagcctccgc ccggggtgag cccctccaga 361 ctccgaatag gagatcaaga gtttgattca ttgcctgctt tactggaatt ctacaaaata 421 cactatttgg acactacaac gttgatagaa ccagtttcca gatccaggca gggtagtgga 481 gtgattctca ggcaggagga ggcggagtat gtgcgagccc tctttgactt taatgggaat 541 gatgaggaag atcttccctt taagaaagga gacatcttga gaatccggga caagcctgaa 601 gagcagtggt ggaatgcgga ggacagcgaa ggcaagagag ggatgattcc agtcccttac 661 gtcgagaagt atagacctgc ctccgcctca gtatcggctc tgattggagg taaccaggag 721 ggttcccacc cacagccact gggtgggccg gagcctgggc cctatgccca acccagcgtc 781 aacactccgc tccctaacct ccagaatggg cccatatatg ccagggttat ccagaagcga 841 gtccccaatg cctacgacaa gacagccttg gctttggagg tcggtgagct ggtaaaggtt 901 acgaagatta atgtgagtgg tcagtgggaa ggggagtgta atggcaaacg aggtcacttc 961 ccattcacac atgtccgtct gctggatcaa cagaatcccg atgaggactt cagctgagta 1021 tagttcaaca gttttgctga cagatgggaa caatcttttt tttttttttc caactgccat 1081 ctatacaatt ttcttacaga tgtcaaaagc agtctagttt atataagcat tctgttacct 1141 gtgatatttt ttagactgaa ctgctccatt cctagtctta attaccatat tcagggtacg 1201 aactggaggg cttgtgtgtt agcttctgaa ttggcaattg gaggcggtag tggtcgtgcc 1261 tgtgtgtatc agaagggata ggtatcttgc ctcctttctc tcaggcagtg caaatcaccc 1321 tgtggaaaac cgatggacag gaaggagtgt tacacactgc ttaccctgat ttattcagtg 1381 gttttgtttt cattctggaa ccatactatc aaatggcgac agactgttcc gttccacccc 1441 cgtgaagtaa tcatgcaccg tgtgaatagt atcaagcagg attgctttca ttgtatggag 1501 catgaccagc gtgtgactca ttctgacatt tcagatccta agaattctaa gaacactact 1561 agaagcattt gttccctcct agtcaatgct tcatactttt tcttgggatt cttttagccc 1621 ttgacattct tgtcccccaa acctgtaagt aggtgaattc ctaagataag tgtgtatttt 1681 cattccaggt gaaaagcagg atgtaccgag cactttattc agtgcatagc tttaagccag 1741 tgttggattc actaagtgga cagccagtct cccagctctc tgccttcccc aaaagggtcg 1801 tagtaggtca cccttctaca gcagctaact agagtcctaa ctaatgggat ccagcagggc 1861 catttctcca gagggccagt atcctattag gagactcttg gaattcttag gttctactca 1921 agagtggaag gaccaatcac ctctgatatt ctgtggaagg ttttggggtc aaattctgcc 1981 ctctgcattc tgtgcaactt gtataaaagt caagttagta ttacatgaat ttggggtagg 2041 gttagtgctt tgaaaaaatg ttgaaccggc tgggcgcggt ggctcacgtc tgtaatccca 2101 gcactttggg aggccgaggc gggtggatca tgaggtcagg agttcgagac cagcctggcc 2161 aacatagtga aaccccatct ctgctaaaga tataaaaaat tagcccggcg tggtggtgca 2221 cgcctgtaat cccagctact cgggaggctg aggcaggaga attgcttcaa cctgggaggt 2281 ggaggctgca gtgagccgag atcgcaccac tgcgttccag cctgagcgac agggcaagac 2341 tcagtctcaa aaaaaaaaaa aaggaaaaaa aaaaaaaaaa aa //