LOCUS BC001711 1031 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 50, mRNA (cDNA clone
MGC:955 IMAGE:3543543), complete cds.
ACCESSION BC001711
VERSION BC001711.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1031)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1031)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: m Column: 18.
FEATURES Location/Qualifiers
source 1..1031
/db_xref="H-InvDB:HIT000030594"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:955 IMAGE:3543543"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1031
/gene="C1orf50"
/gene_synonym="MGC955"
/db_xref="GeneID:79078"
/db_xref="HGNC:HGNC:28795"
CDS 44..643
/gene="C1orf50"
/gene_synonym="MGC955"
/codon_start=1
/product="chromosome 1 open reading frame 50"
/protein_id="AAH01711.1"
/db_xref="GeneID:79078"
/db_xref="HGNC:HGNC:28795"
/translation="MEDAAAPGRTEGVLERQGAPPAAGQGGALVELTPTPGGLALVSP
YHTHRAGDPLDLVALAEQVQKADEFIRANATNKLTVIAEQIQHLQEQARKVLEDAHRD
ANLHHVACNIVKKPGNIYYLYKRESGQQYFSIISPKEWGTSCPHDFLGAYKLQHDLSW
TPYEDIEKQDAKISMMDMLLSQSVALPPCTEPNFQGLTH"
BASE COUNT 295 a 259 c 254 g 223 t
ORIGIN
1 cctactcgca cagcccaggg agtggggagg ataaggcgct gtcatggagg acgccgccgc
61 gccggggcgg accgaggggg tccttgaaag gcaaggagcg ccgccagctg caggccaggg
121 aggagccctg gtggagctca ccccgacccc cggcggcctg gccctggtga gcccctacca
181 cacccaccgg gccggggacc ccttagacct cgtggcgctc gcagagcagg tgcagaaggc
241 tgatgaattc atccgagcaa atgccaccaa caagctgaca gtcatagctg agcaaatcca
301 acatttgcaa gaacaagcca ggaaggtact ggaagatgct cacagagatg ccaacctgca
361 ccatgtagct tgtaatatag tgaaaaaacc tggcaacatt tactatctct ataaacggga
421 gagtggtcag cagtattttt ccatcatttc tccaaaggaa tgggggacaa gttgtccaca
481 tgacttcctt ggtgcctaca aactacagca tgacttgtcc tggactccgt atgaggacat
541 tgagaagcaa gatgctaaaa tcagcatgat ggacatgttg ctaagccagt cagtggccct
601 gcctccgtgc actgaaccca acttccaggg actgactcac tgagagtggg ctttgacaaa
661 cagctctcac aggacctggc tgtcaacctc cttgttgccc ccactgttgc cttgagaatt
721 gaagacatgt aggtgactca caaacttctt ggaaagagac cctgtgtgaa tgtaaatgct
781 gtcattatga cttttaattg ggatgggaat aatcattgag acagagtcac tgtctttcgg
841 gatcctcttt ggaccacaga tacccaagtc agtcagtttc agagtattgg ccagtgtact
901 ttccttcttc ctctccatca cttcttccct taagttaaag tgttagagaa gaccttcttc
961 ccataaaaag gttggtggat cgttttccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa a
//