LOCUS BC001700 539 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens ribosomal protein L27, mRNA (cDNA
clone MGC:2930 IMAGE:3050183), complete cds.
ACCESSION BC001700
VERSION BC001700.2
KEYWORDS MGC.
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 539)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 539)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC001700.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: p Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..539
/db_xref="H-InvDB:HIT000030586"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Skin, melanotic
melanoma."
/db_xref="taxon:32630"
/clone="MGC:2930 IMAGE:3050183"
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..539
/gene="RPL27"
/db_xref="GeneID:6155"
/db_xref="HGNC:HGNC:10328"
/db_xref="MIM:607526"
CDS 69..479
/gene="RPL27"
/codon_start=1
/transl_table=11
/product="ribosomal protein L27"
/protein_id="AAH01700.1"
/db_xref="GeneID:6155"
/db_xref="HGNC:HGNC:10328"
/db_xref="MIM:607526"
/translation="MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVA
GIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFR
DPALKRKARREAKVKFEERYKTGKNKWFFQKLRF"
BASE COUNT 173 a 108 c 129 g 129 t
ORIGIN
1 gagagagaga actagtctcg agtttttttt tttttttttt gctgtaggcc cgggtggttg
61 ctgccgaaat gggcaagttc atgaaacctg ggaaggtggt gcttgtcctg gctggacgct
121 actccggacg caaagctgtc atcgtgaaga acattgatga tggcacctca gatcgcccct
181 acagccatgc tctggtggct ggaattgacc gctacccccg caaagtgaca gctgccatgg
241 gcaagaagaa gatcgccaag agatcaaaga taaaatcttt tgtgaaagtg tataactaca
301 atcacctaat gcccacaagg tactctgtgg atatcccctt ggacaaaact gtcgtcaata
361 aggatgtctt cagagatcct gctcttaaac gcaaggcccg acgggaggcc aaggtcaagt
421 ttgaagagag atacaagaca ggcaagaaca agtggttctt ccagaaactg cggttttaga
481 tgctttgttt tgatcattaa aaattataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//