LOCUS BC001683 1528 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens ChaC, cation transport regulator homolog 1 (E. coli),
mRNA (cDNA clone MGC:2831 IMAGE:2964714), complete cds.
ACCESSION BC001683
VERSION BC001683.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1528)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1528)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147362.
FEATURES Location/Qualifiers
source 1..1528
/db_xref="H-InvDB:HIT000050401"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2831 IMAGE:2964714"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1528
/gene="CHAC1"
/gene_synonym="MGC4504"
/db_xref="GeneID:79094"
/db_xref="HGNC:HGNC:28680"
CDS 101..769
/gene="CHAC1"
/gene_synonym="MGC4504"
/codon_start=1
/product="ChaC, cation transport regulator homolog 1 (E.
coli)"
/protein_id="AAH01683.1"
/db_xref="GeneID:79094"
/db_xref="HGNC:HGNC:28680"
/translation="MKQESAAPNTPPTSQSPTPSAQFPRNDGDPQALWIFGYGSLVWR
PDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVQGE
QVSKALKYLNVREAVLGGYDTKEVTFYPQDAPDQPLKALAYVATPQNPGYLGPAPEEA
IATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLAAIVDAVGTMLPCFCPTEQA
LALV"
BASE COUNT 290 a 494 c 429 g 315 t
ORIGIN
1 ggcacgaggc aggccaggtg tgtgcgtccg tcggtctttc cgtgcccacg ccggagacca
61 gccccggagg ccgcctgggc ctatccctgt gccaggcacc atgaagcagg agtctgcagc
121 cccgaacacc ccgcccacct cgcagtcccc tacgccgtcc gctcagttcc cccgaaacga
181 cggcgaccct caagcgctgt ggattttcgg gtacggctcc ctggtgtgga ggcccgactt
241 cgcctacagc gacagccgtg tgggcttcgt gcgcggctac agccgccgtt tctggcaggg
301 agacaccttc catcggggca gcgacaagat gcctggccgt gtggtgacgc tccttgaaga
361 tcatgagggc tgcacttggg gcgtggcata ccaagtgcaa ggggagcagg taagcaaggc
421 cctgaagtac ctgaatgtgc gagaggcagt gcttggtggc tacgatacca aggaggtcac
481 cttctatccc caagatgctc ctgaccaacc actgaaggca ttggcctatg tggccacccc
541 acagaaccct ggttacctgg gccctgcgcc tgaagaggcc attgccacgc agatcctggc
601 ctgccggggc ttctccggcc acaaccttga atacttgctg cgtctggcag acttcatgca
661 gctctgtggg cctcaggcgc aggacgagca cctggcagcc atcgtggacg ctgtgggcac
721 catgttgccc tgcttctgcc ccaccgagca ggctctggcg ctggtgtgag gggctgagcc
781 cctgcgggga gtgctcatgt ggacatcagg gccagacacc cactccagtg cacaagacag
841 acttgcgacc gcttgagccc actgagcaga tatggtgggt ggctggaggc ttctctttct
901 cagtccctgc ctgtctgcca gcctgcagct ctcctgcttg acactgactt actacttgaa
961 actttattta ttgcaccatg ttggtgtggt gggcaggtgg agggcctgcc ctggacacag
1021 gggccctgct gagcagtggc cccatcctgg aacttgacca gattcccccc agtgctgctg
1081 ctaaccccac accacccagg cctccacctc cccagggagt ctccaagagc ctcgatcctc
1141 tgctcactca gcccagccat ccatagccct gggaattcca cctgccaagg atcccagcag
1201 gctggatgag ggatagtagg gcatgaggag aaggagccct gtaaggactg aggccccggc
1261 cagcccttct cctccaccag ttccccagag cagagctgga gctgatgcct ggacacagct
1321 gctgagcctg gcctgggcct cttacccact tggttgtttt cttgtccctc tgtctgtctg
1381 tctatctact tgtctgtctg ggccactcct gcctgtgtgt tggtctattc ctgggaagct
1441 catcactaca ggccctggca accttcccag tctgtcccat actgttaccc ataaaactat
1501 ctctttaaaa aaaaaaaaaa aaaaaaaa
//