LOCUS BC001667 1018 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens jumping translocation breakpoint, mRNA (cDNA clone
MGC:1919 IMAGE:2823348), complete cds.
ACCESSION BC001667
VERSION BC001667.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1018)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1018)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38455406.
FEATURES Location/Qualifiers
source 1..1018
/db_xref="H-InvDB:HIT000030561"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1919 IMAGE:2823348"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1018
/gene="JTB"
/gene_synonym="B PAR"
/gene_synonym="hJT"
/gene_synonym="HJTB"
/gene_synonym="HSPC222"
/gene_synonym="PAR"
/db_xref="GeneID:10899"
/db_xref="HGNC:HGNC:6201"
/db_xref="MIM:604671"
CDS 376..816
/gene="JTB"
/gene_synonym="B PAR"
/gene_synonym="hJT"
/gene_synonym="HJTB"
/gene_synonym="HSPC222"
/gene_synonym="PAR"
/codon_start=1
/product="jumping translocation breakpoint"
/protein_id="AAH01667.1"
/db_xref="GeneID:10899"
/db_xref="HGNC:HGNC:6201"
/db_xref="MIM:604671"
/translation="MLAGAGRPGLPQGRHLCWLLCAFTLKLCQAEAPVQEEKLSASTS
NLPCWLVEEFVVAEECSPCSNFRAKTTPECGPTGYVEKITCSSSKRNEFKSCRSALME
QRLFWKFEGAVVCVALIFACLVIIRQRQLDRKALEKVRKQIESI"
BASE COUNT 238 a 278 c 280 g 222 t
ORIGIN
1 ggcacgaggc cgggccccga gctcggtccc gcgcccgagg atcctccacg gggctagatg
61 gctgcgtcgg gggcgggagc ggaggtgagc gggcgctagg gccgcgagcc cccgccggcc
121 cttcctccag cgccctgcgg accccgcaga aggcgctcgc ctccctagcc cgcaaaaaca
181 tatcgatttt tctcgctgtg gcaacgggga cgtcctgata gatcctctgc tccaataggc
241 aactccggcc ttccctgccc tgacctggaa cctctgggag ggctgcagag taagtgccgc
301 ctctgcgctc cgacggaggc acgaggcctg tggagtaggt ccctctgttc cgacaggtgc
361 gacacttggc gctccatgct tgcgggtgcc gggaggcctg gcctccccca gggccgccac
421 ctctgctggt tgctctgtgc tttcacctta aagctctgcc aagcagaggc tcccgtgcag
481 gaagagaagc tgtcagcaag cacctcaaat ttgccatgct ggctggtgga agagtttgtg
541 gtagcagaag agtgctctcc atgctctaat ttccgggcta aaactacccc tgagtgtggt
601 cccacaggat atgtagagaa aatcacatgc agctcatcta agagaaatga gttcaaaagc
661 tgccgctcag ctttgatgga acaacgctta ttttggaagt tcgaaggggc tgtcgtgtgt
721 gtggccctga tcttcgcttg tcttgtcatc attcgtcagc gacaattgga cagaaaggct
781 ctggaaaagg tccggaagca aatcgagtcc atatagctac attccaccct tgtatcctgg
841 gtcttagaga ccctatctca gacagtgaaa gtgaaatgga ctgatttgca ctcttggttc
901 tttggagcct tgtggtggaa tccccttttc cccatcttct tctttcagat cattaatgag
961 cagaataaaa agagtaaaat ggtaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//