LOCUS BC001643 1862 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens tumor necrosis factor, alpha-induced protein 1 (endothelial), mRNA (cDNA clone MGC:2317 IMAGE:2823154), complete cds. ACCESSION BC001643 VERSION BC001643.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1862) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1862) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC001643.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 2 Row: p Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 26051238. FEATURES Location/Qualifiers source 1..1862 /db_xref="H-InvDB:HIT000030541" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2317 IMAGE:2823154" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1862 /gene="TNFAIP1" /gene_synonym="B12" /gene_synonym="B61" /gene_synonym="MGC2317" /db_xref="GeneID:7126" /db_xref="HGNC:HGNC:11894" /db_xref="MIM:191161" CDS 197..1147 /gene="TNFAIP1" /gene_synonym="B12" /gene_synonym="B61" /gene_synonym="MGC2317" /codon_start=1 /product="tumor necrosis factor, alpha-induced protein 1 (endothelial)" /protein_id="AAH01643.1" /db_xref="GeneID:7126" /db_xref="HGNC:HGNC:11894" /db_xref="MIM:191161" /translation="MSGDTCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGSLYYTTVR ALTRHDTMLKAMFSGRMEVLTDKEGWILIDRCGKHFGTILNYLRDDTITLPQNRQEIK ELMAEAKYYLIQGLVNMCQSALQDKKDSYQPVCNIPIITSLKEEERLIESSTKPVVKL LYNRSNNKYSYTSNSDDHLLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGR KLAEVCCTSIVYATEKKQTKVEFPEARIYEETLNVLLYETPRVPDNSLLEATSRSRSQ ASPSEDEETFELRDRVRRIHVKRYSTYDDRQLGHQSTHRD" BASE COUNT 432 a 552 c 491 g 387 t ORIGIN 1 ctgaggggca ggcggctgca ggctaggggc ggctcggagt ccgctggcca cccagctgag 61 aggagaggcg cccccgggga cgcactgaga ttatgaggct ctggcctcca ctggccactc 121 actcgtgacc ctttccacca cggcggagcc ttccaagcct acctcctgcc gtgtggtgat 181 ctacctgcag cgggagatgt cgggggacac ctgcctgtgc ccagcctcag gggccaagcc 241 caagctcagt ggcttcaagg gaggagggtt gggcaacaag tatgtccagc tcaacgtggg 301 cggctctctg tactacacca ctgtgcgggc cctgacccgc cacgacacca tgctcaaggc 361 catgttcagt gggcgcatgg aggtgctgac cgacaaagaa ggctggatcc tcatagaccg 421 ttgtggaaag cactttggca ccattttgaa ttacctccga gatgacacca tcaccctccc 481 tcagaaccgg caagaaatca aggaattgat ggctgaagca aagtattacc tcatccaggg 541 gctggtgaat atgtgccaga gtgccctgca ggacaagaag gactcctacc agcctgtgtg 601 caacatcccc atcatcacat ccctaaagga ggaggagcgg ctcatcgaat cctccaccaa 661 gcccgtggtg aagctgctgt acaacagaag caacaacaag tattcctaca ccagcaactc 721 tgacgaccac ctgctgaaaa acatcgagct gtttgacaag ctctccctgc gcttcaacgg 781 ccgcgtgctc ttcatcaagg atgtcattgg tgacgagatc tgctgctggt ccttttatgg 841 ccagggccgt aagctggcag aggtgtgctg tacctccatc gtgtatgcca cggagaagaa 901 gcagaccaag gtggaattcc cagaggcccg aatctatgag gagacactca acgtcctact 961 ctatgagact ccccgcgtcc ccgacaactc cttgttggag gccacaagcc gtagccgcag 1021 ccaggcttcc cccagtgaag atgaggagac ctttgaactg cgggaccgtg tccgccgcat 1081 ccacgtcaag cgctacagca cttacgatga ccggcagctc ggccaccagt ctacccatcg 1141 cgactgacca gaccctcagg gagtcagggc acgggaggcc ctatctccca tcctgtggaa 1201 cccgccccat tggccacccc atgctgctgc tgcctgggtc tctgctctag cacccagagg 1261 catgacaggc cctgctcaga ggtcagaggg tctgggcaga ggagggacca cattcccctg 1321 ccttgcccct gagcacttct ggagactgcg tcctgtccta tctgctcacc atcacccttc 1381 ctgcccgacg gagctgcttc tgctccctgg ggcatatgga ctgacccacc tcctgctgag 1441 aaccttcccc taggccctgt gcagaagggc tactgcccct taggcctcag ctgggggaaa 1501 ggcagttctg gtgctgtaga ggccctggtg cagaaagtgg gacgtctttt ttcctaaggt 1561 gtttaagcac aggcttgata agtttggttt ttaaaaaata atctaggaaa tgaataattc 1621 taaatctagt aatgaggaaa ctgagcattt cttttgccct ccagggtgcc aagaccctac 1681 atatgacaga acccttggcc cttctccatg cctgtgggat ctgtttcttt aaagcacttt 1741 gtactgttat tcaggaggtt gataatctcc ttgacccatg tctttctacc ctaatcccca 1801 cttccctgca gaatcaatct gagggagggg ataaagagga agcaaaaaaa aaaaaaaaaa 1861 aa //