LOCUS BC001634 702 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens vesicle-associated membrane protein 8 (endobrevin),
mRNA (cDNA clone MGC:1585 IMAGE:3538672), complete cds.
ACCESSION BC001634
VERSION BC001634.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 702)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 702)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14043025.
FEATURES Location/Qualifiers
source 1..702
/db_xref="H-InvDB:HIT000030535"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1585 IMAGE:3538672"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..702
/gene="VAMP8"
/gene_synonym="EDB"
/gene_synonym="VAMP5"
/db_xref="GeneID:8673"
/db_xref="HGNC:HGNC:12647"
/db_xref="MIM:603177"
CDS 54..356
/gene="VAMP8"
/gene_synonym="EDB"
/gene_synonym="VAMP5"
/codon_start=1
/product="vesicle-associated membrane protein 8
(endobrevin)"
/protein_id="AAH01634.1"
/db_xref="GeneID:8673"
/db_xref="HGNC:HGNC:12647"
/db_xref="MIM:603177"
/translation="MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHL
RNKTEDLEATSEHFKTTSQKVARKFWWKNVKMIVLICVIVFIIILFIVLFATGAFS"
BASE COUNT 191 a 162 c 189 g 160 t
ORIGIN
1 aggaagccga ctaggcgaat tcacttactg accggcctgg gctgctctga gacatggagg
61 aagccagtga aggtggagga aatgatcgtg tgcggaacct gcaaagtgag gtggagggag
121 ttaagaatat tatgacccag aatgtggagc ggatcctggc ccggggggaa aacttggaac
181 atctccgcaa caagacagag gatctggaag ccacatctga gcacttcaag acgacatcgc
241 agaaggtggc tcggaaattc tggtggaaga acgtgaagat gattgtcctt atctgcgtga
301 ttgtttttat catcatcctc ttcattgtgc tctttgccac tggtgccttc tcttaagtaa
361 cagggaacct ctcccacctg cccttctttt cagggacaac cctccataaa tgtgtgccaa
421 gagggtctcc tttcctgtct tcctctacag agaatgctgc tcggtcctcc tacccctctt
481 cccgaggccc tgctgccacg ttgtatgccc cagaaggtac cttggtcccc cggaaggaga
541 gaaaaaagag agatggactg tggctgcatt tcttgggtcc ttagagtggg ctggagagac
601 ctagagggcc cagcatgtgg ctgggaaact gttggtggcc agtgggtaat aaagaccttt
661 cagtatccct aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//