LOCUS BC001615 1391 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens thioredoxin domain containing 15, mRNA (cDNA clone
MGC:2517 IMAGE:3544923), complete cds.
ACCESSION BC001615
VERSION BC001615.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1391)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1391)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: h Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21362011.
FEATURES Location/Qualifiers
source 1..1391
/db_xref="H-InvDB:HIT000030517"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2517 IMAGE:3544923"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1391
/gene="TXNDC15"
/gene_synonym="UNQ335"
/db_xref="GeneID:79770"
/db_xref="HGNC:HGNC:20652"
CDS 146..1228
/gene="TXNDC15"
/gene_synonym="UNQ335"
/codon_start=1
/product="thioredoxin domain containing 15"
/protein_id="AAH01615.1"
/db_xref="GeneID:79770"
/db_xref="HGNC:HGNC:20652"
/translation="MVPAAGRRPPRVMRLLGWWQVLLWVLGLPVRGVEVAEESGRLWS
EEQPAHPLQVGAVYLGEEELLHDPMGQDRAAEEANAVLGLDTQGDHMVMLSVIPGEAE
DKVSSEPSGVTCGAGGAEDSRCNVRESLFSLDGAGAHFPDREEEYYTEPEVAESDAAP
TEDSNNTESLKSPKVNCEERNITGLENFTLKILNMSQDLMDFLNPNGSDCTLVLFYTP
WCRFSASLAPHFNSLPRAFPALHFLALDASQHSSLSTRFGTVAVPNILLFQGAKPMAR
FNHTDRTLETLKIFIFNQTGIEAKKNVVVTQADQIGPLPSTLIKSVDWLLVFSLFFLI
SFIMYATIRTESIRWLIPGQEQEHVE"
BASE COUNT 347 a 337 c 370 g 337 t
ORIGIN
1 ccaagatggc gcccgccaca gctgccaggt gttaagatgg cggcgcgggg ccgcgcccgc
61 gctcccaggc tctcctcccc cagccttcct ccggctggca gcacgactcg cgtagccgtg
121 cgccgattgc ctctcggcct gggcaatggt cccggctgcc ggtcgacgac cgccccgcgt
181 catgcggctc ctcggctggt ggcaagtatt gctgtgggtg ctgggacttc ccgtccgcgg
241 cgtggaggtt gcagaggaaa gtggtcgctt atggtcagag gagcagcctg ctcaccctct
301 ccaggttggg gctgtgtacc tgggtgagga ggagctcctg catgacccga tgggccagga
361 cagggcagca gaagaggcca atgcggtgct ggggctggac acccaaggcg atcacatggt
421 gatgctgtct gtgattcctg gggaagctga ggacaaagtg agttcagagc ctagcggcgt
481 cacctgtggt gctggaggag cggaggactc aaggtgcaac gtccgagaga gccttttctc
541 tctggatggc gctggagcac acttccctga cagagaagag gagtattaca cagagccaga
601 agtggcggaa tctgacgcag ccccgacaga ggactccaat aacactgaaa gtctgaaatc
661 cccaaaggtg aactgtgagg agagaaacat tacaggatta gaaaatttca ctctgaaaat
721 tttaaatatg tcacaggacc ttatggattt tctgaaccca aacggtagtg actgtactct
781 agtcctgttt tacaccccgt ggtgccgctt ttctgccagt ttggcccctc actttaactc
841 tctgccccgg gcatttccag ctcttcactt tttggcactg gatgcatctc agcacagcag
901 cctttctacc aggtttggca ccgtagctgt tcctaatatt ttattatttc aaggagctaa
961 accaatggcc agatttaatc atacagatcg aacactggaa acactgaaaa tcttcatttt
1021 taatcagaca ggtatagaag ccaagaagaa tgtggtggta actcaagccg accaaatagg
1081 ccctcttccc agcactttga taaaaagtgt ggactggttg cttgtatttt ccttattctt
1141 tttaattagt tttattatgt atgctaccat tcgaactgag agtattcggt ggctaattcc
1201 aggacaagag caggaacatg tggagtagtg atggtctgaa agaagttgga aagaggaact
1261 tcaatccttc gtttcagaaa ttagtgctac agtttcatac attttctcca gtgacgtgtt
1321 gacttgaaac ttcaggcaga ttaaaagaat catttgttga acaactgaat gtaaaaaaaa
1381 aaaaaaaaaa a
//