LOCUS BC001561 1978 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens deoxyribonuclease I-like 1, mRNA (cDNA clone MGC:5152
IMAGE:3456429), complete cds.
ACCESSION BC001561
VERSION BC001561.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1978)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1978)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: p Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58430945.
FEATURES Location/Qualifiers
source 1..1978
/db_xref="H-InvDB:HIT000030492"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5152 IMAGE:3456429"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1978
/gene="DNASE1L1"
/gene_synonym="DNAS1L1"
/gene_synonym="XIB"
/db_xref="GeneID:1774"
/db_xref="HGNC:HGNC:2957"
/db_xref="MIM:300081"
CDS 173..1081
/gene="DNASE1L1"
/gene_synonym="DNAS1L1"
/gene_synonym="XIB"
/codon_start=1
/product="deoxyribonuclease I-like 1"
/protein_id="AAH01561.1"
/db_xref="GeneID:1774"
/db_xref="HGNC:HGNC:2957"
/db_xref="MIM:300081"
/translation="MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLV
RILARCDIMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYF
YRSHKTQVLSSYVYNDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNA
LYDVFLEVSQHWQSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTV
RASTHCTYDRVVLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQ
AHSVQPLSLTVLLLLSLLSPQLCPAA"
BASE COUNT 448 a 567 c 541 g 422 t
ORIGIN
1 ccctattcag gcaggagctg ctcttctggg gtatcgcgat ccacttaagg atgaggcaga
61 cttggtgaca agctggtctg agcagcgctt ccagagccag aactgagccc agtgagagcg
121 caccctgggg cagcctggat tcctggggtg tccccggcag ccacacacag ccatgcacta
181 cccaactgca ctcctcttcc tcatcctggc caatggggcc caggcctttc gcatctgcgc
241 cttcaatgcc cagcggctga cactggccaa ggtggccagg gagcaggtga tggacacctt
301 agttcggata ctggctcgct gtgacatcat ggtgctgcag gaggtggtgg actcttccgg
361 cagcgccatc cccctcctgc ttcgagaact caatcgattt gatggctctg ggccctacag
421 caccctgagc agcccccagc tggggcgcag cacctacatg gagacgtatg tgtacttcta
481 tcggtcacac aaaacacagg tcctgagttc ctacgtgtac aacgatgagg atgacgtctt
541 tgcccgggag ccatttgtgg cccagttctc tttgcccagc aatgtccttc ccagcctggt
601 gttggtcccg ctgcacacca ctcctaaggc cgtagagaag gagctgaacg ccctctacga
661 tgtgtttctg gaggtctccc agcactggca gagcaaggac gtgatcctgc ttggggactt
721 caatgctgac tgcgcttcac tgaccaaaaa gcgcctggac aagctggagc tgcggactga
781 gccaggcttc cactgggtga ttgccgatgg ggaggacacc acagtgcggg ccagcaccca
841 ctgcacctat gaccgcgtcg tgctgcacgg ggagcgctgc cggagtctgc tgcacactgc
901 ggctgccttt gacttcccca cgagcttcca gctcaccgag gaggaggccc tcaacatcag
961 tgaccactac cccgtggagg tggagctgaa gctgagccag gcacacagcg tccagcctct
1021 cagcctcact gttctgttgc tgctatcact cctgtcccct cagctgtgcc ctgctgcctg
1081 agcgtccccc taccccccca gggcctgctg ccttttggga cttaaacccc agcctccccc
1141 gtccatccag ccctggggct ggggggcttc aactatagtt gccctgtgac tgtagtccac
1201 ccctgcctgc cttgtttgat ttggctcttg ttctttggtt gggcttgtgc ctagattagg
1261 agaggaagcc aggggccctg cactcatgcc acctgccagg tagtgtagta tcaggagtgg
1321 agacaaagtg ggctctgggt tggggtaggg gaagggaggg ttcagaaaga ggaatgaaga
1381 tgttgtatga caagaaggaa agttactgag aacaaaaacc cagattggtg agataggaca
1441 cttgtgcagc agatatgcca atgggccatg tttattgtgg attggtaaga atcaccagga
1501 aaccattaag ccccaatagc tacaaggagg gtggttaatc tgctatatca aactccttcc
1561 ctgaaaccag caaacaccgg gaaacatttt ggctcattat aatccggtga acaatgcagt
1621 caggcctgtt ataaccgctg agcagccaca ctcgcacctc ctgggtgctg tagtctgtgt
1681 tggtacaggc ttctgcatgc ctggtaaagt ccagccaagg ctggtcaagg caacatctcc
1741 acacagaaaa tctgcaccag ttatgtaagc taaaaagctg tgtgaaccca ggtgtcccgg
1801 aaaggggctg caggacacag caaaatgcca gcagcgtgcc ggacccctcc cttccatcct
1861 cctctccaaa gaacagaggt caggaaaaac actggctggg acgctagaag ggtcatgtgt
1921 taactataat cacatttatg gtttggaacc atcaccccaa ggtaaaaaaa aaaaaaaa
//