LOCUS BC001550 1222 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens stratifin, mRNA (cDNA clone MGC:5019 IMAGE:3457665),
complete cds.
ACCESSION BC001550
VERSION BC001550.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1222)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1222)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: g Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5454051.
FEATURES Location/Qualifiers
source 1..1222
/db_xref="H-InvDB:HIT000030487"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5019 IMAGE:3457665"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1222
/gene="SFN"
/db_xref="GeneID:2810"
/db_xref="MIM:601290"
CDS 54..704
/gene="SFN"
/codon_start=1
/product="SFN protein"
/protein_id="AAH01550.1"
/db_xref="GeneID:2810"
/db_xref="MIM:601290"
/translation="MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLL
SVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYRVFYLKMKGDYYRYLAEV
ATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAIS
LAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGEAPQEPQS"
misc_feature 81..659
/gene="SFN"
/note="14-3-3; Region: 14-3-3 protein"
/db_xref="CDD:pfam00244"
BASE COUNT 258 a 380 c 368 g 216 t
ORIGIN
1 cattggtccc aggcagcagt tagcccgccg cccgcctgtg tgtccccaga gccatggaga
61 gagccagtct gatccagaag gccaagctgg cagagcaggc cgaacgctat gaggacatgg
121 cagccttcat gaaaggcgcc gtggagaagg gcgaggagct ctcctgcgaa gagcgaaacc
181 tgctctcagt agcctataag aacgtggtgg gcggccagag ggctgcctgg agggtgctgt
241 ccagtattga gcagaaaagc aacgaggagg gctcggagga gaaggggccc gaggtgcgtg
301 agtaccgggt cttctacctg aagatgaagg gtgactacta ccgctacctg gccgaggtgg
361 ccaccggtga cgacaagaag cgcatcattg actcagcccg gtcagcctac caggaggcca
421 tggacatcag caagaaggag atgccgccca ccaaccccat ccgcctgggc ctggccctga
481 acttttccgt cttccactac gagatcgcca acagccccga ggaggccatc tctctggcca
541 agaccacttt cgacgaggcc atggctgatc tgcacaccct cagcgaggac tcctacaaag
601 acagcaccct catcatgcag ctgctgcgag acaacctgac actgtggacg gccgacaacg
661 ccggggaaga ggggggcgag gctccccagg agccccagag ctgagtgttg cccgccaccg
721 ccccgccctg ccccctccag tcccccaccc tgccgagagg actagtatgg ggtgggaggc
781 cccacccttc tcccctaggc gctgttcttg ctccaaaggg ctccgtggag agggactggc
841 agagctgagg ccacctgggg ctggggatcc cactcttctt gcagctgttg agcgcaccta
901 accactggtc atgcccccac ccctgctctc cgcacccgct tcctcccgac cccaggacca
961 ggctacttct cccctcctct tgcctccctc ctgcccctgc tgcctctgat cgtaggaatt
1021 gaggagtgtc ccgccttgtg gctgagaact ggacagtggc aggggctgga gatgggtgtg
1081 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg cgcgcgcgcc agtgcaagac cgagattgag
1141 ggaaagcatg tctgctgggt gtgaccatgt ttcctctcaa taaagttccc ctgtgacact
1201 caaaaaaaaa aaaaaaaaaa aa
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