LOCUS BC001531 2122 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens defective in sister chromatid cohesion 1 homolog (S.
cerevisiae), mRNA (cDNA clone MGC:3319 IMAGE:3510131), complete
cds.
ACCESSION BC001531
VERSION BC001531.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2122)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2122)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001531.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: b Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13129095.
FEATURES Location/Qualifiers
source 1..2122
/db_xref="H-InvDB:HIT000030477"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3319 IMAGE:3510131"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2122
/gene="DSCC1"
/gene_synonym="DCC1"
/gene_synonym="hDCC1"
/db_xref="GeneID:79075"
/db_xref="HGNC:HGNC:24453"
CDS 74..1255
/gene="DSCC1"
/gene_synonym="DCC1"
/gene_synonym="hDCC1"
/codon_start=1
/product="defective in sister chromatid cohesion 1 homolog
(S. cerevisiae)"
/protein_id="AAH01531.1"
/db_xref="GeneID:79075"
/db_xref="HGNC:HGNC:24453"
/translation="MKRTRDEVDATLQIAKLNAAELLPAVHCLGFGPGASGAAAGDFC
LLELEPTLCQQLEDGHSLVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTPD
QLKKEDSHCNIIHTEIFGFSNNYWELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNS
SKYTTEDLLDQIQASEEEIMTQLQVLNACKIGGYWRILEFDYEMKLLNHVTQLVDSES
WSFGKVPLNTCLQELGPLEPEEMIEHCLKCYGKKYVDEGEVYFELDADKICRAAARML
LQNAVKFNLAEFQEVWQQSVPEGMVTSLDQLKGLALVDRHSRPEIIFLLKVDDLPEDN
QERFNSLFSLREKWTEEDIAPYIQDLCGEKQTIGALLTKYSHSSMQNGVKVYNSRRPI
S"
BASE COUNT 667 a 370 c 453 g 632 t
ORIGIN
1 ttgggaactt ctttcttgcc cgccaagccc gcagccaccc gggcgcggcg ggactcctag
61 acccggcgct gcgatgaaga ggacccgcga cgaggtggat gcgacgctgc agatcgccaa
121 gctgaatgcg gccgagctgc tgccggcggt gcactgcctg ggcttcggcc ctggggccag
181 cggcgctgca gccggcgact tctgcctgct ggagctggag cccacgctgt gccagcagct
241 ggaggatgga cacagtcttg tgattcgtgg tgataaagac gagcaagctg tgctgtgcag
301 taaagacaaa acatacgact tgaagatagc agacacttcc aatatgttgc ttttcattcc
361 tggttgtaaa actccggacc agttgaagaa ggaagattca cactgtaaca ttattcacac
421 tgagatcttt ggtttttcta ataattattg ggaattaaga agacgtagac ccaagttaaa
481 gaagctaaag aaacttttga tggaaaatcc atatgaagga cctgacagtc aaaaagagaa
541 ggattcaaat agctcaaaat atacaactga agatttgctt gatcaaattc aggcaagtga
601 ggaagaaata atgacccaat tacaagttct aaatgcctgt aagattggag gttattggag
661 gattcttgaa tttgattatg agatgaaact tctgaatcat gtaactcagc ttgtggattc
721 tgaatcatgg tcttttggta aagttccttt gaacacatgc cttcaggaac tcggaccatt
781 ggagccagag gaaatgatag aacactgtct taaatgttat gggaagaaat atgtagatga
841 aggcgaagtt tattttgagt tggatgctga taaaatatgt agagcagcag cacgaatgct
901 acttcagaat gcggtgaaat tcaatctcgc tgagtttcaa gaagtgtggc agcagagtgt
961 tcctgaagga atggtaacta gtcttgatca gcttaagggt ttagcgctgg tggatagaca
1021 ctcgagacca gaaatcatat ttttgctgaa agtagatgat ttacctgagg ataatcagga
1081 acgttttaat agccttttct ctctaaggga gaagtggaca gaagaagata ttgctccata
1141 tattcaagat ttgtgtggag agaagcaaac cataggtgca ttactcacta aatattctca
1201 ttcttcgatg caaaatggtg ttaaagttta taattcgaga agacccattt cttaaaagaa
1261 caacggtctt ttcttcagga ctcaagttgc tttataaagt tgctggatag aagaaaaata
1321 acttgtactt ttatttctga cttttagaaa cctagtcttc taaggcattt ttctcctcat
1381 cttaagcatt ttgaaactac tgttatttct taaatgttat aggatgtagc tttaaaatta
1441 tatttgtact atgtacacag tgtaaacaag gacaaaagaa ttctttccta tattatgtct
1501 gaggtctcta tgatttattt aaagtttggc tttttatatt taaaatgtca tttctttact
1561 taggatttga tgttctaatc attaatacac ttaagttttc cagagaacta aatagtaata
1621 gtttcataga agagaactat ttattcactt aaatatcatt tctcaagtga gtgagttccc
1681 ctctactttt agccttccac ccaaactgga agcctctagg tgctatcaat tatttatatc
1741 catcgtttac atccatgaaa ttggctgaat aattactcct ctgcctggcg tagacatgcg
1801 ctttgggaaa aaaacgagtt tataatccta taatgaagaa tactggcaca ggcaatgctc
1861 actcgaaaac ttcaagtaat ttctagttgg ttttggaatg cttgataaag ttcctttaca
1921 gctttatttt cctgatttgt tttggtttag atcaaagttc aaattaattt taacttagct
1981 aatgaactca tcaccaggac agttggaggg ggtaggccga ggttaaatgg tccacgtttc
2041 aaaaatgtta atggctaatc cataattaaa gaaggtttaa ctgttaaaaa aaaaaaaaaa
2101 aaaaaaaaaa aaaaaaaaaa aa
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