LOCUS BC001505 2088 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 1 family, member A1, mRNA (cDNA
clone MGC:2318 IMAGE:2988388), complete cds.
ACCESSION BC001505
VERSION BC001505.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2088)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2088)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC001505.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: n Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25777722.
FEATURES Location/Qualifiers
source 1..2088
/db_xref="H-InvDB:HIT000030461"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2318 IMAGE:2988388"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2088
/gene="ALDH1A1"
/gene_synonym="ALDC"
/gene_synonym="ALDH-E1"
/gene_synonym="ALDH11"
/gene_synonym="MGC2318"
/gene_synonym="RALDH1"
/db_xref="GeneID:216"
/db_xref="HGNC:HGNC:402"
/db_xref="MIM:100640"
CDS 26..1531
/gene="ALDH1A1"
/gene_synonym="ALDC"
/gene_synonym="ALDH-E1"
/gene_synonym="ALDH11"
/gene_synonym="MGC2318"
/gene_synonym="RALDH1"
/codon_start=1
/product="aldehyde dehydrogenase 1 family, member A1"
/protein_id="AAH01505.1"
/db_xref="GeneID:216"
/db_xref="HGNC:HGNC:402"
/db_xref="MIM:100640"
/translation="MSSSGTPDLPVLLTDLKIQYTKIFINNEWHDSVSGKKFPVFNPA
TEEELCQVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLL
LATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPI
GVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGV
VNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPC
IVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGN
PLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFSNVTD
EMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQAG
TVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKISQKNS"
BASE COUNT 650 a 388 c 478 g 572 t
ORIGIN
1 ctgtgttcca ggagccgaat cagaaatgtc atcctcaggc acgccagact tacctgtcct
61 actcaccgat ttgaagattc aatatactaa gatcttcata aacaatgaat ggcatgattc
121 agtgagtggc aagaaatttc ctgtctttaa tcctgcaact gaggaggagc tctgccaggt
181 agaagaagga gataaggagg atgttgacaa ggcagtgaag gccgcaagac aggcttttca
241 gattggatcc ccgtggcgta ctatggatgc ttccgagagg gggcgactat tatacaagtt
301 ggctgattta atcgaaagag atcgtctgct gctggcgaca atggagtcaa tgaatggtgg
361 aaaactctat tccaatgcat atctgaatga tttagcaggc tgcatcaaaa cattgcgcta
421 ctgtgcaggt tgggctgaca agatccaggg ccgtacaata ccaattgatg gaaatttttt
481 tacatataca agacatgaac ctattggtgt atgtggccaa atcattcctt ggaatttccc
541 gttggttatg ctcatttgga agatagggcc tgcactgagc tgtggaaaca cagtggttgt
601 caaaccagca gagcaaactc ctctcactgc tctccacgtg gcatctttaa taaaagaggc
661 agggtttcct cctggagtag tgaatattgt tcctggttat gggcctacag caggggcagc
721 catttcttct cacatggata tagacaaagt agccttcaca ggatcaacag aggttggcaa
781 gttgatcaaa gaagctgccg ggaaaagcaa tctgaagagg gtgaccctgg agcttggagg
841 aaagagccct tgcattgtgt tagctgatgc cgacttggac aatgctgttg aatttgcaca
901 ccatggggta ttctaccacc agggccagtg ttgtatagcc gcatccagga tttttgtgga
961 agaatcaatt tatgatgagt ttgttcgaag gagtgttgag cgggctaaga agtatatcct
1021 tggaaatcct ctgaccccag gagtcactca aggccctcag attgacaagg aacaatatga
1081 taaaatactt gacctcattg agagtgggaa gaaagaaggg gccaaactgg aatgtggagg
1141 aggcccgtgg gggaataaag gctactttgt ccagcccaca gtgttctcta atgttacaga
1201 tgagatgcgc attgccaaag aggagatttt tggaccagtg cagcaaatca tgaagtttaa
1261 atctttagat gacgtgatca aaagagcaaa caatactttc tatggcttat cagcaggagt
1321 gtttaccaaa gacattgata aagccataac aatctcctct gctctgcagg caggaacagt
1381 gtgggtgaat tgctatggcg tggtaagtgc ccagtgcccc tttggtggat tcaagatgtc
1441 tggaaatgga agagaactgg gagagtacgg tttccatgaa tatacagagg tcaaaacagt
1501 cacagtgaaa atctctcaga agaactcata aagaaaatac aagagtggag agaagctctt
1561 caatagctaa gcatctcctt acagtcacta atatagtaga ttttaaagac aaaatttttc
1621 ttttcttgat ttttttaaac ataagctaaa tcatattagt attaatacta cccatagaaa
1681 acttgacatg tagcttcttc tgaaagaatt atttgccttc tgaaatgtga cccccaagtc
1741 ctatcctaaa taaaaaaaga caaattcgga tgtatgatct ctctagcttt gtcatagtta
1801 tgtgattttc ctttgtagct acttttgcag gataataatt ttatagaaaa ggaacagttg
1861 catttagctt ctttccctta gtgactcttg aagtacttaa catacacgtt aactgtagag
1921 taaattgctc tgttcccagt agttataaag tccttggact gttttgaaaa gtttcctagg
1981 atgtcatgtc tgcttgtcaa aagaaataat ccctgtaata tttagctgta aactgaatat
2041 aaagcttaat aaaaacaacc ttgcatgaaa aaaaaaaaaa aaaaaaaa
//