LOCUS BC001457 1426 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TruB pseudouridine (psi) synthase homolog 2 (E. coli),
mRNA (cDNA clone MGC:900 IMAGE:3138788), complete cds.
ACCESSION BC001457
VERSION BC001457.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1426)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1426)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC001457.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7661555.
FEATURES Location/Qualifiers
source 1..1426
/db_xref="H-InvDB:HIT000030428"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:900 IMAGE:3138788"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1426
/gene="TRUB2"
/gene_synonym="CLONE24922"
/gene_synonym="RP11-339B21.1"
/db_xref="GeneID:26995"
/db_xref="HGNC:HGNC:17170"
CDS 30..1025
/gene="TRUB2"
/gene_synonym="CLONE24922"
/gene_synonym="RP11-339B21.1"
/codon_start=1
/product="TruB pseudouridine (psi) synthase homolog 2 (E.
coli)"
/protein_id="AAH01457.1"
/db_xref="GeneID:26995"
/db_xref="HGNC:HGNC:17170"
/translation="MGSAGLSRLHGLFAVYKPPGLKWKHLRDTVELQLLKGLNARKPP
APKQRVRFLLGPMEGSEEKELTLTATSVPSFINHPLVCGPAFAHLKVGVGHRLDAQAS
GVLVLGVGHGCRLLTDMYNAHLTKDYTVRGLLGKATDDFREDGRLVEKTTYDHVTREK
LDRILAVIQGSHQKALVMYSNLDLKTQEAYEMAVRGLIRPMNKSPMLITGIRCLYFAP
PEFLLEVQCMHETQKELRKLVHEIGLELKTTAVCTQVRRTRDGFFTLDSALLRTQWDL
TNIQDAIRAATPQVAAELEKSLSPGLDTKQLPSPGWSWDSQGPSSTLGLERGAGQ"
BASE COUNT 355 a 373 c 417 g 281 t
ORIGIN
1 aggtccagcg ggtgctgtga tcttcaagta tggggtctgc tggcttgtcg cggctgcatg
61 ggcttttcgc ggtctataag cccccggggc taaaatggaa gcacctgcgg gatacagtgg
121 agctacaact tctgaagggt ctcaatgcca ggaagcctcc cgctcctaaa cagcgtgttc
181 gcttcttgct gggccccatg gaaggcagcg aagagaagga gctgaccctc acagccacca
241 gcgtaccctc tttcatcaac catccactgg tatgtggacc agcattcgcc catctcaagg
301 ttggcgtggg acatcggttg gatgcccagg cttctggagt acttgtgctc ggcgtgggac
361 atggatgcag gctcctcacc gatatgtaca atgctcatct taccaaggat tacacagtgc
421 gtggcctcct gggcaaagct acagatgact tccgtgagga cgggaggctg gtagagaaga
481 caacctatga ccacgtgacc agagagaagc tggaccgcat tctggccgtt atccaaggct
541 cccatcagaa ggccctggtg atgtactcca acctcgacct gaagacccag gaggcctatg
601 agatggccgt gagaggcctg atccggccca tgaacaagtc cccgatgctg ataactggca
661 tccgatgcct ctactttgca cctccggaat tcctcttaga ggtgcagtgc atgcatgaga
721 cgcagaaaga gctgcggaag ttggttcatg aaatcggcct ggaactaaag accactgctg
781 tctgcaccca agtgcggcgc acgcgcgacg gcttcttcac gctagacagt gccctcctga
841 ggacccagtg ggacctaacc aacatccagg atgctatccg ggctgctacc cctcaggtag
901 ctgcagagct ggagaagagc ttgagcccgg ggctggacac caagcagctc cccagtccgg
961 gatggtcctg ggactcccag ggcccgagct ctaccttggg gctggagagg ggtgcggggc
1021 agtgaatgcc caggcagctc ctggggcagt ggatggataa atagaagaac tgctatgagc
1081 tggacctgat agctgtgcag aaagtgagag caggggcacc ttttctacgt gtgacacaaa
1141 actcaagctg taacagaaag gtcaatggac ttgacccaac tgagaaggaa aaacttctgt
1201 atggaggaaa agacagtaaa catgacagac tgatagaaag tattggcaga ccaggcgtgg
1261 tggcgggcac ttgtaatccc agctactccc aaggctgagg caggagaatt gcttgagccc
1321 aggagtttaa ggttgtagtg cgctagacgg cgcctgtgaa tagccactgc actctagtct
1381 ggggaacata tgagacccct gccatctcaa aaaaaaaaaa aaaaaa
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