LOCUS BC001457 1426 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens TruB pseudouridine (psi) synthase homolog 2 (E. coli), mRNA (cDNA clone MGC:900 IMAGE:3138788), complete cds. ACCESSION BC001457 VERSION BC001457.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1426) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1426) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC001457.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: h Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7661555. FEATURES Location/Qualifiers source 1..1426 /db_xref="H-InvDB:HIT000030428" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:900 IMAGE:3138788" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1426 /gene="TRUB2" /gene_synonym="CLONE24922" /gene_synonym="RP11-339B21.1" /db_xref="GeneID:26995" /db_xref="HGNC:HGNC:17170" CDS 30..1025 /gene="TRUB2" /gene_synonym="CLONE24922" /gene_synonym="RP11-339B21.1" /codon_start=1 /product="TruB pseudouridine (psi) synthase homolog 2 (E. coli)" /protein_id="AAH01457.1" /db_xref="GeneID:26995" /db_xref="HGNC:HGNC:17170" /translation="MGSAGLSRLHGLFAVYKPPGLKWKHLRDTVELQLLKGLNARKPP APKQRVRFLLGPMEGSEEKELTLTATSVPSFINHPLVCGPAFAHLKVGVGHRLDAQAS GVLVLGVGHGCRLLTDMYNAHLTKDYTVRGLLGKATDDFREDGRLVEKTTYDHVTREK LDRILAVIQGSHQKALVMYSNLDLKTQEAYEMAVRGLIRPMNKSPMLITGIRCLYFAP PEFLLEVQCMHETQKELRKLVHEIGLELKTTAVCTQVRRTRDGFFTLDSALLRTQWDL TNIQDAIRAATPQVAAELEKSLSPGLDTKQLPSPGWSWDSQGPSSTLGLERGAGQ" BASE COUNT 355 a 373 c 417 g 281 t ORIGIN 1 aggtccagcg ggtgctgtga tcttcaagta tggggtctgc tggcttgtcg cggctgcatg 61 ggcttttcgc ggtctataag cccccggggc taaaatggaa gcacctgcgg gatacagtgg 121 agctacaact tctgaagggt ctcaatgcca ggaagcctcc cgctcctaaa cagcgtgttc 181 gcttcttgct gggccccatg gaaggcagcg aagagaagga gctgaccctc acagccacca 241 gcgtaccctc tttcatcaac catccactgg tatgtggacc agcattcgcc catctcaagg 301 ttggcgtggg acatcggttg gatgcccagg cttctggagt acttgtgctc ggcgtgggac 361 atggatgcag gctcctcacc gatatgtaca atgctcatct taccaaggat tacacagtgc 421 gtggcctcct gggcaaagct acagatgact tccgtgagga cgggaggctg gtagagaaga 481 caacctatga ccacgtgacc agagagaagc tggaccgcat tctggccgtt atccaaggct 541 cccatcagaa ggccctggtg atgtactcca acctcgacct gaagacccag gaggcctatg 601 agatggccgt gagaggcctg atccggccca tgaacaagtc cccgatgctg ataactggca 661 tccgatgcct ctactttgca cctccggaat tcctcttaga ggtgcagtgc atgcatgaga 721 cgcagaaaga gctgcggaag ttggttcatg aaatcggcct ggaactaaag accactgctg 781 tctgcaccca agtgcggcgc acgcgcgacg gcttcttcac gctagacagt gccctcctga 841 ggacccagtg ggacctaacc aacatccagg atgctatccg ggctgctacc cctcaggtag 901 ctgcagagct ggagaagagc ttgagcccgg ggctggacac caagcagctc cccagtccgg 961 gatggtcctg ggactcccag ggcccgagct ctaccttggg gctggagagg ggtgcggggc 1021 agtgaatgcc caggcagctc ctggggcagt ggatggataa atagaagaac tgctatgagc 1081 tggacctgat agctgtgcag aaagtgagag caggggcacc ttttctacgt gtgacacaaa 1141 actcaagctg taacagaaag gtcaatggac ttgacccaac tgagaaggaa aaacttctgt 1201 atggaggaaa agacagtaaa catgacagac tgatagaaag tattggcaga ccaggcgtgg 1261 tggcgggcac ttgtaatccc agctactccc aaggctgagg caggagaatt gcttgagccc 1321 aggagtttaa ggttgtagtg cgctagacgg cgcctgtgaa tagccactgc actctagtct 1381 ggggaacata tgagacccct gccatctcaa aaaaaaaaaa aaaaaa //