LOCUS BC001449 2713 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein R, mRNA (cDNA
clone MGC:2039 IMAGE:3139052), complete cds.
ACCESSION BC001449
VERSION BC001449.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2713)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2713)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC001449.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: f Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14141188.
FEATURES Location/Qualifiers
source 1..2713
/db_xref="H-InvDB:HIT000030422_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2039 IMAGE:3139052"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2713
/gene="HNRPR"
/gene_synonym="hnRNP-R"
/gene_synonym="HNRNPR"
/db_xref="GeneID:10236"
/db_xref="HGNC:HGNC:5047"
/db_xref="MIM:607201"
CDS 110..2020
/gene="HNRPR"
/gene_synonym="hnRNP-R"
/gene_synonym="HNRNPR"
/codon_start=1
/product="HNRPR protein"
/protein_id="AAH01449.1"
/db_xref="GeneID:10236"
/db_xref="HGNC:HGNC:5047"
/db_xref="MIM:607201"
/translation="MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAE
RLDEIFQTGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVM
KTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQ
PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEA
AQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTGLTEGL
VDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEE
PDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVK
AMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIR
GRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGG
RGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGSRG
NRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGGDYSGNYGYNNDNQ
EFYQDTYGQQWK"
BASE COUNT 834 a 488 c 688 g 703 t
ORIGIN
1 cagggggggg agggggtggc gcgcgcgcca tttctagtcg ttttcaaagc gcctcgcgct
61 gattctcacg ggcccggctg ccggcccccg ctctgccctg cataataaaa tggctaatca
121 ggtgaatggt aatgcggtac agttaaaaga agaggaagaa ccaatggata cttccagtgt
181 aactcacaca gaacactaca agacactgat agaggcaggc ctcccacaga aggtggcaga
241 aagacttgat gaaatatttc agacaggatt ggtagcttat gtcgatcttg atgaaagagc
301 aattgatgct ctcagggaat ttaatgaaga aggagctctg tctgtactac agcagttcaa
361 ggaaagtgac ttatcacatg ttcagaacaa aagtgcattt ttatgtggag ttatgaagac
421 ctacaggcag agagagaaac aggggagcaa ggtgcaagag tccacaaagg gacctgatga
481 agcgaagatc aaggccttgc ttgagagaac tggttatact ctggatgtaa ccacaggaca
541 gaggaagtat ggtggtcctc caccagacag tgtgtactct ggcgtgcaac ctggaattgg
601 aacggaggta tttgtaggca aaataccaag ggatttatat gaggatgagt tggtgcccct
661 ttttgagaag gccggaccca tttgggatct acgtcttatg atggatccac tgtccggtca
721 gaatagaggg tatgcattta tcaccttctg tggaaaggaa gctgcacagg aagccgtgaa
781 actgtgtgac agctatgaaa ttcgccctgg taaacacctt ggagtgtgca tttctgtggc
841 aaacaacaga ctttttgttg gatccattcc gaagaataag actaaagaaa acattttgga
901 agaattcagt aaagtcacag gtttaacaga gggtttggtg gacgttattc tctatcatca
961 acccgatgac aaaaagaaga atcgggggtt ctgcttcctt gaatatgagg atcacaagtc
1021 agcagcacaa gccagacgcc ggctgatgag tggaaaagta aaagtgtggg gaaatgtagt
1081 tacagttgaa tgggctgacc ctgtggaaga accagatcca gaagtcatgg ctaaggtaaa
1141 agttttgttt gtgagaaact tggctactac ggtgacagaa gaaatattgg aaaagtcatt
1201 ttctgaattt ggaaaactcg aaagagtaaa gaagttgaaa gattatgcat ttgttcattt
1261 tgaagacaga ggagcagctg ttaaggctat ggatgaaatg aatggcaaag aaatagaagg
1321 ggaagaaatt gaaatagtct tagccaagcc accagacaag aaaaggaaag agcgccaagc
1381 tgctagacag gcctccagaa gcactgcgta tgaagattat tactaccacc ctcctcctcg
1441 catgccacct ccaattagag gtcggggtcg tggtgggggg agaggtggat atggctaccc
1501 tccagattac tacggctatg aagattacta tgatgattac tatggttatg attatcacga
1561 ctatcgtgga ggctatgaag atccctacta cggctatgat gatggctatg cagtaagagg
1621 aagaggagga ggaaggggag ggcgaggtgc tccaccacca ccaaggggga ggggagcacc
1681 acctccaaga ggtagagctg gctattcaca gaggggggca cctttgggac caccaagagg
1741 ctctaggggt ggcagagggg gtcctgctca acagcagaga ggccgtggtt cccgtggatc
1801 tcggggcaat cgtgggggca atgtaggagg caagagaaag gcagatgggt acaaccagcc
1861 tgattccaag cgtcgtcaga ccaacaacca acagaactgg ggttcccaac ccatcgctca
1921 gcagccgctt cagcaaggtg gtgactattc tggtaactat ggttacaata atgacaacca
1981 ggaattttat caggatactt atgggcaaca gtggaagtag acaagtaagg gcttgaaaat
2041 gatactggca agatacgatt ggctctagat ctacattctt caaaaaaaaa aaaaattggc
2101 ttaactgttt catctttaag tagcattttg ctgccatttg tattgggctg aagaaatcac
2161 tattgtgtat atactcaagt ctttttattt ttcctctttt cataaatgct cttggacatt
2221 attgggcttg cagagttccc ttattctggg gattacaatg cttttatcgt ttcaggcttc
2281 attttagctt caaaacaagc tgggcacact gttaaatcat gattttgcag aacctttggt
2341 tttggacagt ttcatttttt tggatttggg atagattaca taggagtatg gagtatgctg
2401 taaataaaaa tacaagctag tgctttgtct tagtagtttt aagaaattaa agcaaacaaa
2461 tttaagtttt cttgtattga aaataaccta tgattgtatg ttttgcattc ctagaagtag
2521 gttaactgtg tttttaaatt gttataactt cacacctttt tgaaatctgc cctacaaaat
2581 ttgtttggct taaacgtcaa aagccgtgac aatttgttct ttgatgtgat tgtatttcca
2641 atttcttgtt catgtaagat ttcaataaaa ctaaaaaatc tattcaaaac attaaaaaaa
2701 aaaaaaaaaa aaa
//