LOCUS BC001443 1987 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1, mRNA (cDNA clone MGC:1482 IMAGE:3138881), complete cds. ACCESSION BC001443 VERSION BC001443.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1987) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1987) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC001443.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: d Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4759139. FEATURES Location/Qualifiers source 1..1987 /db_xref="H-InvDB:HIT000030419" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1482 IMAGE:3138881" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1987 /gene="SLC9A3R1" /gene_synonym="EBP50" /gene_synonym="NHERF" /db_xref="GeneID:9368" /db_xref="HGNC:HGNC:11075" /db_xref="MIM:604990" CDS 189..1265 /gene="SLC9A3R1" /gene_synonym="EBP50" /gene_synonym="NHERF" /codon_start=1 /product="solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1" /protein_id="AAH01443.1" /db_xref="GeneID:9368" /db_xref="HGNC:HGNC:11075" /db_xref="MIM:604990" /translation="MSADAAAGAPLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEP GSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKL GVQVREELLRAQEAPGQAEPPAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKG PSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSA IRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEA ALESPRPALVRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILDFNISLAMAKERA HQKRSSKRAPQMDWSKKNELFSNL" BASE COUNT 423 a 624 c 583 g 357 t ORIGIN 1 gtcctctctc ggctcctcgc ggctcgcggc ggccgacggt tcctgggaca cctgcttgct 61 tggcccgtcc ggcggctcag ggcttctctg ctgcgctccc ggttcgctgg acgggaagaa 121 gggctgggcc gtcccgtccc gtccccatcg gaaccccaag tcgcgccgct gacccgtcgc 181 agggcgagat gagcgcggac gcagcggccg gggcgcccct gccccggctc tgctgcctgg 241 agaagggtcc gaacggctac ggcttccacc tgcacgggga gaagggcaag ttgggccagt 301 acatccggct ggtggagccc ggctcgccgg ccgagaaggc ggggctgctg gcgggggacc 361 ggctggtgga ggtgaacggc gaaaacgtgg agaaggagac ccaccagcag gtggtgagcc 421 gcatccgcgc cgcactcaac gccgtgcgcc tgctggtggt cgaccccgag acggacgagc 481 agctgcagaa gctcggcgtc caggtccgag aggagctgct gcgcgcccag gaagcgccgg 541 ggcaggccga gccgccggcc gccgccgagg tgcagggggc tggcaacgaa aatgagcctc 601 gcgaggccga caagagccac ccggagcagc gcgagcttcg gcctcggctc tgtaccatga 661 agaagggccc cagtggctat ggcttcaacc tgcacagcga caagtccaag ccaggccagt 721 tcatccggtc agtggaccca gactccccgg ctgaggcttc agggctccgg gcccaggatc 781 gcattgtgga ggtgaacggg gtctgcatgg aggggaagca gcatggggac gtggtgtccg 841 ccatcagggc tggcggggac gagaccaagc tgctggtggt ggacagggaa actgacgagt 901 tcttcaagaa atgcagagtg atcccatctc aggagcacct gaatggtccc ctgcctgtgc 961 ccttcaccaa tggggagata cagaaggaga acagtcgtga agccctggca gaggcagcct 1021 tggagagccc caggccagcc ctggtgagat ccgcctccag tgacaccagc gaggagctga 1081 attcccaaga cagcccccca aaacaggact ccacagcgcc ctcgtctacc tcctcctccg 1141 accccatcct agacttcaac atctccctgg ccatggccaa agagagggcc caccagaaac 1201 gcagcagcaa acgggccccg cagatggact ggagcaagaa aaacgaactc ttcagcaacc 1261 tctgagcgcc ctgctgccac ccagtgactg gcagggccga gccagcattc caccccacct 1321 ttttccttct ccccaattac tcccctgaat caatgtacaa atcagcaccc acatcccctt 1381 tcttgacaaa tgatttttct agagaactat gttcttccct gactttaggg aaggtgaatg 1441 tgttcccgtc ctcccgcagt cagaaaggag actctgcctc cctcctcctc actgagtgcc 1501 tcatcctacc gggtgtccct ttgccaccct gcctgggaca tcgctggaac ctgcaccatg 1561 ccaggatcat gggaccaggc gagagggcac cctcccttcc tcccccatgt gataaatggg 1621 tccagggctg atcaaagaac tctgactgca gaactgccgc tctcagtgga cagggcatct 1681 gttaccctga gacctgtggc agacacgtct tgttttcatt tgatttttgt taagagtgca 1741 gtattgcaga gtctagagga atttttgttt ccttgattaa catgattttc ctggttgtta 1801 catccagggc atggcagtgg cctcagcctt aaacttttgt tcctactccc accctcagcg 1861 aactgggcag cacggggagg gtttggctac ccctgcccat ccctgagcca ggtaccacca 1921 ttgtaaggaa acactttcag aaattcagct ggttcctcca aaaaaaaaaa aaaaaaaaaa 1981 aaaaaaa //