LOCUS BC001434 1357 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens chromosome 11 open reading frame 48, mRNA (cDNA clone
MGC:2477 IMAGE:3138904), complete cds.
ACCESSION BC001434
VERSION BC001434.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1357)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1357)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC001434.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46198300.
FEATURES Location/Qualifiers
source 1..1357
/db_xref="H-InvDB:HIT000030411"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2477 IMAGE:3138904"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1357
/gene="C11orf48"
/db_xref="GeneID:79081"
/db_xref="HGNC:HGNC:28351"
CDS 217..1008
/gene="C11orf48"
/codon_start=1
/product="chromosome 11 open reading frame 48"
/protein_id="AAH01434.2"
/db_xref="GeneID:79081"
/db_xref="HGNC:HGNC:28351"
/translation="MALVPGRSKEDGLWTRNSPGSSQHPESPRLPNPLWDRGKIGKVE
GHQHIQDFSQKSHLPSIVVESSEVNEESGDLHLPHEELLLLTDGEEEDAEAFFQDQSE
EPGWAWSPQDPRSPLRTFNAGLSWGQDQDEEDACWILEDTACLEATNHCPFWDSTGSR
VCRSGFVEYSHLLPPNSFEGAEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAPPQ
EAGVQCTCQHYTVREEAQKTPPADPACPEREDSHGSGSPFKASQD"
BASE COUNT 387 a 347 c 368 g 255 t
ORIGIN
1 cagcattttc cgcaaggaat ccatggccgc ctgcacagcc agcggagcgc ccacgggagc
61 tccccgcagc cgcaagctgt tgccgcgcgg tctcactacc ccttggcgca ggctagagcg
121 ccctatagca gaaaccatag ataagcggcc ggctagagag gacctgctcg aggaaacgtt
181 tggaatccgg agcgcttgga tctcagaatc accaccatgg cccttgtgcc agggagaagc
241 aaggaggatg ggctttggac tagaaatagc ccaggctcct cccagcatcc agaaagtccc
301 aggctgccca accctctctg ggacagagga aaaattggca aggttgaagg tcaccagcac
361 attcaggatt tctctcaaaa gtcccatctg ccgtctattg tggtggaatc cagtgaggtg
421 aatgaagaga gtggggatct ccatttgccc catgaggagc tgctgctgct cactgatggt
481 gaggaagagg atgctgaggc cttcttccaa gaccaaagtg aagagccagg ctgggcttgg
541 agcccacagg accctagaag tcctttaaga acatttaacg ctggactcag ctgggggcag
601 gaccaggatg aagaagatgc ttgttggatt cttgaggaca cagcatgtct ggaagccacc
661 aaccactgtc ccttctggga ctcaacaggc tcccgtgttt gtagaagtgg ctttgtggaa
721 tattcccatc tcctgcctcc taatagcttt gagggagctg aagaagaagc tgttcaaacg
781 ccggcgggtg ttgaatcggg agcggcgtct gaggcaccgg gtggtcgggg ctgtgataga
841 ccaagggctg atcacgcggc accacctcaa gaagcgggcg tccagtgcac gtgccaacat
901 tacactgtca gggaagaagc gcagaaaact cctccagcag atccggcttg cccagaaaga
961 gaagacagcc atggaagtgg aagccccttc aaagccagcc aggactagtg aaccacagct
1021 caaaaggcaa aagaagacaa aagcccccca ggatgtagaa atgaaggacc ttgaagatga
1081 gagctaaacc tcttccacta gaagattctc aactggagcc agccttcaga ctcagtggtt
1141 gtttcagagg actttgacaa aagcaaggcc ccttttcact ctccagattt cctcctacct
1201 aatggcctac tgacctcccc tagagggatg tctttgggag ggaagaaggt acagaagaaa
1261 gattggagaa gggcctctct agcagtcaac tccatttgta ataaagccct agcactctga
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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