LOCUS BC001432 2233 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein F, mRNA (cDNA
clone MGC:2197 IMAGE:3138435), complete cds.
ACCESSION BC001432
VERSION BC001432.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2233)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2233)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC001432.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: b Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14141150.
FEATURES Location/Qualifiers
source 1..2233
/db_xref="H-InvDB:HIT000030409"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2197 IMAGE:3138435"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2233
/gene="HNRPF"
/gene_synonym="HNRNPF"
/gene_synonym="mcs94-1"
/db_xref="GeneID:3185"
/db_xref="HGNC:HGNC:5039"
/db_xref="MIM:601037"
CDS 160..1407
/gene="HNRPF"
/gene_synonym="HNRNPF"
/gene_synonym="mcs94-1"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein F"
/protein_id="AAH01432.1"
/db_xref="GeneID:3185"
/db_xref="HGNC:HGNC:5039"
/db_xref="MIM:601037"
/translation="MMLGPEGGEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVH
FIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP
NSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFA
SQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARR
YIGIVKQAGLERMRPGAYSTGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRY
GDSEFTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVE
FATHEEAVAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSAAQATYSGL
ESQSVSGCYGAGYSGQNSMGGYD"
BASE COUNT 643 a 451 c 553 g 586 t
ORIGIN
1 gccgcgcttg cctggtagca acagaaacca gtcctgctcg cctccgtgga catttcatta
61 ccatccagaa gtgtctccca ctgaaggcat ccgtggttgt ttttaagcca caaaaaagcc
121 acacccaaga tcacctgaca cccaccctga caagtgtcca tgatgctggg ccctgaggga
181 ggtgaaggct ttgtggtcaa gctccgtggc ctgccctggt cctgctctgt tgaggacgtg
241 cagaacttcc tctctgactg cacgattcat gatggggccg caggtgtcca tttcatctac
301 actagagagg gcaggcagag tggtgaggct tttgttgaac ttggatcaga agatgatgta
361 aaaatggccc tgaaaaaaga cagggaaagc atgggacacc ggtacattga ggtgttcaag
421 tcccacagaa ccgagatgga ttgggtgttg aagcacagtg gtcccaacag tgccgacagc
481 gccaacgatg gcttcgtgcg gcttcgagga ctcccatttg gatgcacaaa ggaagaaatt
541 gttcagttct tctcagggtt ggaaattgtg ccaaacggga tcacattgcc tgtggacccc
601 gaaggcaaga ttacagggga agcgttcgtg cagtttgcct cgcaggagtt agctgagaag
661 gctctaggga aacacaagga gaggataggg cacaggtaca ttgaggtgtt taagagcagc
721 caggaggaag ttaggtcata ctcagatccc cctctgaagt tcatgtccgt gcagcggcca
781 gggccctatg accggcccgg gactgccagg aggtacattg gcatcgtgaa gcaggcaggc
841 ctggaaagga tgaggcctgg tgcctacagc acaggctacg ggggctacga ggagtacagt
901 ggcctcagtg atggctacgg cttcaccacc gacctgttcg ggagagacct cagctactgt
961 ctctccggaa tgtatgacca cagatacggc gacagtgagt tcacagtgca gagcaccaca
1021 ggccactgtg tccacatgag gggcctgccg tacaaagcga ccgagaacga catttacaac
1081 ttcttctctc ctctcaaccc tgtgagagtc catattgaga ttggcccaga tggaagagtg
1141 acgggtgaag cagatgttga gtttgctact catgaagaag ctgtggcagc tatgtccaaa
1201 gacagggcca atatgcagca cagatatata gaactcttct tgaattcaac aacaggggcc
1261 agcaatgggg cgtatagcag ccaggtgatg caaggcatgg gggtgtctgc tgcccaggcc
1321 acttacagtg gcctggagag ccagtcagtg agtggctgtt acggggccgg ctacagtggg
1381 cagaacagca tgggtggcta tgactagttt tgttaggaac atttgagtta cttcaatcat
1441 tttcacaggc agccaacaag caattaagag cagttataat agaggaagct gggggaccca
1501 ttttgcacca tgagtttgtg aaaaatctgg attaaaaaat tacctcttca gtgttttctc
1561 atgcaaaatt ttcttctagc atgtgataat gagtaaacta aaactatttt cagcttttct
1621 caattaacat tttggtagta tacttcagag tgatgttatc taagtttaag tagtttaagt
1681 atgttaaatg tggatctttt acaccacatc acagtgaaca cactggggag acgtgctttt
1741 ttggaaaact caaaggtgct agctccctga ttcaaagaaa tatttctcat gtttgttcat
1801 tctagtttat attttcattt aaaatccttt aggttaagtt taagcttttt aaaagttagt
1861 tttgagaatt gagacacaat actaatactg taggaattgg tgaggccttg acttaaaact
1921 ttctttgtac tgtgatttcc ttttgggtgt attttgctaa gtgaaacttg ttaaattttt
1981 tgttaactaa atttttttct taaaataaag actttttcac aatgactggc acagattact
2041 cagcaaaaga tagcaaaacg ggtggttgaa gataattcat tttaatcgta atgtatttta
2101 gtgtgaattt aaaaatttca tacatcaaat ctatgatctc ccttatattc ttatgatgag
2161 gctaaataaa agtctaataa aaatgttaaa tatgtgaaaa aaaaaaaaaa aaaaaaaaaa
2221 aaaaaaaaaa aaa
//