LOCUS BC001423 2682 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) activator subunit 3
(PA28 gamma; Ki), mRNA (cDNA clone MGC:1394 IMAGE:3139753),
complete cds.
ACCESSION BC001423
VERSION BC001423.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2682)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2682)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001423.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: m Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30410795.
FEATURES Location/Qualifiers
source 1..2682
/db_xref="H-InvDB:HIT000030401"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1394 IMAGE:3139753"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2682
/gene="PSME3"
/gene_synonym="Ki"
/gene_synonym="PA28-gamma"
/gene_synonym="PA28G"
/gene_synonym="REG-GAMMA"
/db_xref="GeneID:10197"
/db_xref="HGNC:HGNC:9570"
/db_xref="MIM:605129"
CDS 218..982
/gene="PSME3"
/gene_synonym="Ki"
/gene_synonym="PA28-gamma"
/gene_synonym="PA28G"
/gene_synonym="REG-GAMMA"
/codon_start=1
/product="proteasome (prosome, macropain) activator
subunit 3 (PA28 gamma; Ki)"
/protein_id="AAH01423.1"
/db_xref="GeneID:10197"
/db_xref="HGNC:HGNC:9570"
/db_xref="MIM:605129"
/translation="MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSF
LKEPILNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVF
VMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEE
TVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLR
LIISELRNQYVTLHDMILKNIEKIKRPRSSNAETLY"
BASE COUNT 671 a 646 c 627 g 738 t
ORIGIN
1 ggcgaaagcc gggagggcga gcgagagagc aagcaggcag caggctgccg gcgggcgggc
61 ggacggcaca gagggaggga gcgagcgagc agtgagtaag ccagcaaggg cggtcgggtc
121 ccgaggtcag ccgagatttc tcaggtccct ccggccccct ccctggagtc cacagcgcct
181 ccggtgtcca gaggatcgga cacggcccgg cccggccatg gcctcgttgc tgaaggtgga
241 tcaggaagtg aagctcaagg ttgattcttt cagggagcgg atcacaagtg aggcagaaga
301 cttggtggca aattttttcc caaagaagtt attagaactt gatagttttc tgaaggaacc
361 aatcttaaac atccatgacc taactcagat ccactctgac atgaatctcc cagtccctga
421 ccccattctt ctcaccaata gccatgatgg actggatggt cccacttata agaagcgaag
481 gttggatgag tgtgaagaag ccttccaagg aaccaaggtg tttgtgatgc ccaatgggat
541 gctgaaaagc aaccagcagc tggtggacat tattgagaaa gtgaaacctg agatccggct
601 gttgattgag aaatgtaaca cggtcaaaat gtgggtacag ctcctgattc ccaggataga
661 agatggaaac aactttgggg tgtccattca ggaggaaaca gttgcagagc taagaactgt
721 tgagagtgaa gctgcatctt atctggacca gatttctaga tattatatta caagagccaa
781 attggtttct aaaatagcta aatatcccca tgtggaggac tatcgccgca ccgtgacaga
841 gattgatgag aaagaatata tcagccttcg gctcatcata tcagagctga ggaatcaata
901 tgtcactcta catgacatga tcctgaaaaa tatcgagaag atcaaacggc cccggagcag
961 caatgcagag actctgtact gaggccaggg ccagggccag gggactctgt gagtctggct
1021 caagaccgac attgccttgg tttgttacat gactatcgtg atggggaaac tggctggaaa
1081 tagtaatcac acctctctgt ttttagttag agtctaatga aactctcatc tagttctgtg
1141 atgtgtttac ctcttttttc aggcctcagg aactcttcta tttccttccc taatacccca
1201 cacccaacct gtcgtaattt ctggagaact ccaggtttgt gtgtgcagga tgttggcaca
1261 aaaatacctg tgttttcatt ctccccctct ctccctcctg tgtcttgcgc tttatgtttt
1321 cttccgtttg ataattagtt ggttaaaagc tgagggaacc ggaaggaaag tgctaggtgt
1381 tttttaggaa ctagggtggc ggggggacga acttctcttc ctcacatgag gttactgttt
1441 ctttcctctg tggggcattg gatcctccca cagttgccct ggtgatgact tagggcttcc
1501 catctgtgta catcccactt tgaatcttga tcgtgacaag aaatacctta ggccttcagt
1561 caattccgaa gctccttcag ttgtttttat aatgggcgtt ttcacatgca catatgtgta
1621 tgcatgtata cgcccataca gacatgcaca cacagactcc tactccatta gctaacatac
1681 cctccctctc cacaacccct gtcacatacc tttcaggagg tgacagttgt cttagttgtc
1741 atctacccag acaaacgtcc tgggcccgtc ctccctcctg atactgtagc ctcttggtac
1801 ccagggtgag ttggtggaga acagagagat gagaagcaga gggcttgggg aaagcctgtt
1861 cctctctgac tcagcccttt ttggcattat tgcaagagct tgactcctgg ttgccttttc
1921 ccagccagtt ttcagttggg gtgaaggttt ctgcaagtgt gaggtccaga tgctgctgct
1981 catgttgggc tttccttttg ggaactattt ctctttattt atagtgtcgg gcttccgggg
2041 aaagcaatca ttggtgtgta tgtgtatgtg catgcacaca cgtgcatata cacatttgtg
2101 tatgtggaaa tgtgctgggc aagtcaaaac tatagaagag ttgcctcctg tctctcgaat
2161 cttccagaga tatcacttaa ttgttaacag cttttgtgtt aatccccttc agcccctagc
2221 tcttttattc taccacggct ggagagttga tacctgcagt cagcctgcca gtgactctta
2281 gtgtctgttt ctgacttatt tttcctgtct ctgtcttcca acccccaata atatttccac
2341 cggggatgca tcatttttac tcccaatatt ctgtagagag ggagtcagga tgctgtcttc
2401 ccacgaatag tactcagtaa caaaccaatt gcattttagt tgggcagtgc tcccacccac
2461 cctccagatc ccttccagct aaaacccttc ccccttccct ccatgtgttt ctcagtttcc
2521 cgtttcgttt gttggactgt tccactgccc ctcctcctca ccctatcacc catggatcgt
2581 aatgtaaaat tcttttacca tgtcaagaaa ttattaaaaa tacaggtact ttgacctctt
2641 tctaaagccg caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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