LOCUS BC001417 1780 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens small nuclear ribonucleoprotein 200kDa (U5), mRNA (cDNA clone IMAGE:3140321), partial cds. ACCESSION BC001417 VERSION BC001417.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1780) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1780) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 8, 2003 this sequence version replaced BC001417.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: i Column: 22. FEATURES Location/Qualifiers source 1..1780 /db_xref="H-InvDB:HIT000030395" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3140321" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1780 /gene="SNRNP200" /gene_synonym="BRR2" /gene_synonym="HELIC2" /gene_synonym="U5-200KD" /db_xref="GeneID:23020" /db_xref="HGNC:HGNC:30859" /db_xref="MIM:601664" CDS <1..1487 /gene="SNRNP200" /gene_synonym="BRR2" /gene_synonym="HELIC2" /gene_synonym="U5-200KD" /codon_start=3 /product="SNRNP200 protein" /protein_id="AAH01417.4" /db_xref="GeneID:23020" /db_xref="HGNC:HGNC:30859" /db_xref="MIM:601664" /translation="VVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQ MVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKT IENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCI SIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSK AIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTD KGVESVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGP VVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKL DFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD" BASE COUNT 448 a 452 c 469 g 411 t ORIGIN 1 aggtggtggt ggcttctcgg agtctctgct ggggcatgaa cgtggctgcc cacctggtaa 61 tcatcatgga tacccagtac tacaatggca agatccacgc ctatgtggat taccccatct 121 atgacgtgct tcagatggtg ggccacgcca accgcccttt gcaggacgat gaggggcgct 181 gtgtcatcat gtgtcagggc tccaagaagg atttcttcaa gaagttctta tatgagccat 241 tgccagtaga atctcacctg gaccactgta tgcatgacca cttcaatgct gagatcgtca 301 ccaagaccat tgagaacaag caggatgctg tggactacct cacctggacc tttctgtacc 361 gccgcatgac acagaacccc aattactaca acctgcaggg catctcccat cgtcacttgt 421 cggaccactt gtcagagctg gtggagcaga ccctgagtga cctggagcag tccaagtgca 481 tcagcatcga ggacgagatg gacgtggcgc ctctgaacct aggcatgatc gccgcctact 541 attacatcaa ctacaccacc attgagctct tcagcatgtc cctcaatgcc aagaccaagg 601 tgcgagggct tatcgagatc atctccaatg cagcagagta tgagaacatt cccatccggc 661 accatgaaga caatctcctg aggcagttgg ctcagaaggt cccccacaag ctgaataacc 721 ctaagttcaa tgatccgcac gtcaagacca acctgctcct gcaggctcac ttgtctcgca 781 tgcagctgag tgctgagttg cagtcagata cggaggaaat ccttagtaag gcaatccggc 841 tcatccaggc ctgcgtggat gtcctttcca gcaatgggtg gctcagccct gctctggcag 901 ctatggaact ggcccagatg gtcacccaag ccatgtggtc caaggactca tacctgaagc 961 agctgccaca cttcacctct gagcatatca aacgttgcac agacaaggga gtggagagtg 1021 ttttcgacat catggagatg gaggatgaag aacggaacgc gttgcttcag ctgactgaca 1081 gccagattgc agatgtggct cgcttttgta accgctaccc taatatcgaa ctatcttatg 1141 aggtggtaga taaggacagc atccgcagtg gcgggccagt tgtggtgctg gtgcagctgg 1201 agcgagagga ggaagtcaca ggccctgtca ttgcgcctct cttcccgcag aaacgtgaag 1261 agggctggtg ggtggtgatt ggagatgcca agtccaatag cctcatctcc atcaagaggc 1321 tgaccttgca gcagaaggcc aaggtgaagt tggactttgt ggccccagcc actggtgccc 1381 acaactacac tctgtacttc atgagtgacg cttacatggg atgtgaccag gagtacaaat 1441 tcagcgtgga tgtgaaagaa gctgagacag acagtgattc agattgagtc ctgaggcatt 1501 tacttttggg taaaggagag ttgagcctga attaggaatg tgtacattgt aggaatcctg 1561 gttgtgggga ccaggtctgt gggcctcagg tctggccagc cagggctggt gctgtccccg 1621 cctacctcca cttcctttcc cttgctcact ctggatccag tgacagcagg tgtcatgggt 1681 caagcataaa tcatatatag cattttcagg catgttcctg gtagttcttt tgagtctgac 1741 attctaataa aataatttgt agaaaaaaaa aaaaaaaaaa //