LOCUS BC001406 1066 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens stromal cell-derived factor 2, mRNA (cDNA clone MGC:2977 IMAGE:3140716), complete cds. ACCESSION BC001406 VERSION BC001406.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1066) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1066) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 28, 2003 this sequence version replaced BC001406.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: e Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14141194. FEATURES Location/Qualifiers source 1..1066 /db_xref="H-InvDB:HIT000030386" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2977 IMAGE:3140716" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_9" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1066 /gene="SDF2" /db_xref="GeneID:6388" /db_xref="HGNC:HGNC:10675" /db_xref="MIM:602934" CDS 19..654 /gene="SDF2" /codon_start=1 /product="stromal cell-derived factor 2" /protein_id="AAH01406.1" /db_xref="GeneID:6388" /db_xref="HGNC:HGNC:10675" /db_xref="MIM:602934" /translation="MAVVPLLLLGGLWSAVGASSLGVVTCGSVVKLLNTRHNVRLHSH DVRYGSGSGQQSVTGVTSVDDSNSYWRIRGKSATVCERGTPIKCGQPIRLTHVNTGRN LHSHHFTSPLSGNQEVSAFGEEGEGDYLDDWTVLCNGPYWVRDGEVRFKHSSTEVLLS VTGEQYGRPISGQKEVHGMAQPSQNNYWKAMEGIFMKPSELLKAEAHHAEL" BASE COUNT 280 a 240 c 285 g 261 t ORIGIN 1 ctccgcgata cagttaggat ggctgtagta cctctgctgt tgttgggggg tttgtggagc 61 gctgtgggag cgtccagcct gggtgtcgtt acttgcggct ccgtggtgaa gctactcaat 121 acgcgccaca acgtccgact gcactcacac gacgtgcgct atgggtcagg tagtgggcag 181 cagtcagtga caggtgtaac ctctgtggat gacagcaaca gttactggag gatacggggg 241 aagagtgcca cagtgtgtga gaggggaacc cccatcaagt gtggccagcc catccggctg 301 acacatgtca acactggccg aaacctccat agtcaccact tcacttcacc tctttctgga 361 aaccaggaag tgagtgcttt tggtgaggaa ggtgaaggtg attatctgga tgactggaca 421 gtgctctgta atggacccta ctgggtgaga gatggtgagg tgcggttcaa acactcttcc 481 actgaggtac tgctgtctgt cacaggagaa caatatggtc gacctatcag tgggcaaaaa 541 gaggtgcatg gcatggccca gccaagtcag aacaactact ggaaagccat ggaaggcatc 601 ttcatgaagc ccagtgagtt gttgaaggca gaagcccacc atgcagagct gtgaatctag 661 aggctctgag ccactgttaa cgcacaatgt tcacagacat ctgttgctgc ctcaccttgg 721 gatccctgcc acaagttcct tgggcagtgg ccatgtcacc attgagatga agatatacaa 781 cagaaaatag tggctgtgtt tggaagcttc agccctgcac atttgaacta gtcactctcc 841 cagacttgcg tgggtcagtt ctttctgagt agaggacttg ctggtaaagg ggcagatgct 901 ttttattagt actgataaaa caaactgagg gaaacatccc tcttagctgg gaaactttta 961 ctcttcagga gcttggcatc atggactgtt aatgtatgtg attttccccc tattttctct 1021 ctccaaaatg ataaaaacaa taattttaaa aaaaaaaaaa aaaaaa //