LOCUS BC001385 1708 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens leucine rich repeat (in FLII) interacting protein 1,
mRNA (cDNA clone IMAGE:3050879), partial cds.
ACCESSION BC001385
VERSION BC001385.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1708)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1708)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001385.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: k Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758689.
FEATURES Location/Qualifiers
source 1..1708
/db_xref="H-InvDB:HIT000086001"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3050879"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1708
/gene="LRRFIP1"
/gene_synonym="FLAP-1"
/gene_synonym="FLIIAP1"
/gene_synonym="GCF-2"
/gene_synonym="HUFI-1"
/gene_synonym="MGC10947"
/gene_synonym="TRIP"
/db_xref="GeneID:9208"
/db_xref="MIM:603256"
CDS 129..>1708
/gene="LRRFIP1"
/gene_synonym="FLAP-1"
/gene_synonym="FLIIAP1"
/gene_synonym="GCF-2"
/gene_synonym="HUFI-1"
/gene_synonym="MGC10947"
/gene_synonym="TRIP"
/codon_start=1
/product="LRRFIP1 protein"
/protein_id="AAH01385.1"
/db_xref="GeneID:9208"
/db_xref="MIM:603256"
/translation="MTSPAAAQSREIDCLSPEAQKLAEARLAAKRAARAEAREIRMKE
LERQQKEVEERPEKDFTEKGSRNMPGLSAATLASLGGTSSRRGSGDTSISIDTEASIR
EIKDSLAEVEEKYKKAMVSNAQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEK
NKEFEREKHAHSILQFQFAEVKEALKQREEMLEKHGIILNSEIATNGETSDTLNNVGY
QGPTKMTKEELNALKSTGDGTLGRASEVEVKNEIVANVGKREILHNTEKEQHTEDTVK
DCVDIEVFPAGENTEDQKSSEDTAPFLGTLAGATYEEQVQSQILESSSLPENTVQVES
NEVMGAPDDRTRTPLEPSNCWSDLDGGNHTENVGEAAVTQVEEQAGTVASCPLGHSDD
TVYHDDKCMVEVPQELETSTGHSLEKEFTNQEAAEPKEVPAHSTEVGRDHNEEEGEET
GLRDEKPIKTEVPGSPAGTEGNCQEATGPSTVDTQNEPLDMKEPDEEKSDQQGEALDS
SQKKTKKKKKKKKKKKKK"
BASE COUNT 564 a 381 c 485 g 278 t
ORIGIN
1 cgttcactta gcggcgagtg gctccgtctc cgcggacaga gcgcgcgccc cctggcccgg
61 cccgcgaggg gctcccggcg cggtccccga gcatttcccg ccgggtggag cgggccgagc
121 ccggcaggat gaccagcccc gcggccgctc aaagccggga gatcgactgt ttgagcccgg
181 aagcgcagaa gctggcggaa gcccggctcg ctgcaaaacg ggcggcccgc gcggaggctc
241 gcgagatccg catgaaggag ctggagcggc agcagaagga ggtagaagag agaccagaaa
301 aagattttac tgagaagggg tctcgtaaca tgccgggcct gtctgcagcc acgctggcct
361 ctctgggtgg gacttcctct cggagaggca gcggagacac ctccatctcc atcgacaccg
421 aggcatccat cagggaaatc aaggactctc tagcagaagt tgaagagaaa tataagaagg
481 ctatggtttc caatgctcag ctagacaatg aaaagacaaa cttcatgtac caggttgata
541 ccctaaaaga tatgttgctg gagcttgaag aacagctggc tgaatctagg cggcagtacg
601 aagagaaaaa caaagaattt gaaagggaaa aacacgccca cagtatactg caatttcagt
661 ttgctgaagt caaggaggcc ctgaagcaaa gagaggaaat gctcgagaaa catggaataa
721 tcctaaattc agaaatagct accaatggag agacttccga caccctcaat aatgttggat
781 accaaggtcc taccaagatg acaaaagaag agttaaatgc cctcaagtcg acaggggatg
841 ggaccctagg aagagccagt gaagtggagg tgaaaaatga aatcgtggcg aatgtgggga
901 aaagagaaat cttgcacaat actgagaaag aacaacacac agaggacaca gtgaaggact
961 gtgtggacat agaggtattc cctgctggtg agaataccga ggaccagaaa tcctctgaag
1021 acactgcccc attcctagga accttagcag gtgctaccta tgaggaacag gttcaaagcc
1081 aaattcttga gagcagttct ctccctgaaa acacagtaca ggttgagtca aatgaggtca
1141 tgggtgcacc agatgacagg accagaactc cccttgagcc atccaactgt tggagtgact
1201 tagatggtgg gaaccacaca gagaatgtgg gagaggcagc agtgactcag gttgaagagc
1261 aggcaggcac agtggcctcg tgtcctttag ggcatagtga tgacacagtt tatcatgatg
1321 acaaatgtat ggtagaggtc ccccaagagt tagagacaag cacagggcat agtttagaga
1381 aagaattcac caaccaggaa gcagctgagc ccaaggaggt tccagcgcac agtacagaag
1441 taggtaggga tcacaacgaa gaagagggtg aagaaacagg attaagggac gagaaaccaa
1501 tcaagacaga agttcctggt tctccagcag gaactgaggg caactgtcag gaagcgacag
1561 gtccaagtac agtagacact caaaatgaac ccttagatat gaaagagccc gatgaagaaa
1621 agagtgacca acagggagag gcattggact catcgcagaa gaagacaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//